Gene Paes_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1775 
Symbol 
ID6458874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1933745 
End bp1936156 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content56% 
IMG OID642725759 
Productcapsular exopolysaccharide family 
Protein accessionYP_002016435 
Protein GI194334575 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00109135 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0290835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATA ACGATCCCAA CCAGTTTGAA CAGGAAATAA ACATCCAGGA ACTCCTGCAG 
GTTCTCTGGA ACAACAAGCT TATCATCGGT GCTGTTACCG GCCTTGTGGT GATGCTTGTG
CTGCTCTACC ACTTTTCGGC CACACCTGAA TACCGCTCGA CTTCCATGGT TCTTATCAAG
CAGGACAAGG GCGGTGCGAT GGGGGAGATG ATCAATCCTT TCGGGTCACT GACCGGCTTC
GACCTGCAGA ACGACATCGA ACTGGTCAAG TCCTTTCCGC TGGCTGAAGA GGTTGTTCGT
AATCTCTACA CCAAAAAGGA TCGTGATACC CTGCAGCTCT TTGGGGAACG AAACTATGTG
TCGCCGATCG GCGGCCTGTT CGGCTGGTTG AGCTTTGGCG GCGCCGCCGA AAAAGACAGC
GTCGATTACG ACGTCCAGAT GCGCAAATAT GCTGCTGCTC TGCAGGAGCG CATCAAGGTC
GGTAACAGCC GCGACACCGA TATTCTCAAC GTTTCCGTCT CCAGCCCCTT CCCTGAAGAA
GCAGCCCTGC TCACCAACGC CATTTGCCAG GCCTACATGC GCAAGGATAT CGAGTGGAAT
GCCGATCAGG CCATGTCGGT CAAAGAGTTT GTAGGTGAAC AGCTTGCCCA GCAGCAGCGC
GAGATTTCAA GCGTGGAAAA CAAGCTCTCG TCCTACATGA AGAACCAGAA TATCTACGAG
CTGACCGGTA ACGCCGAAAA GCTGCTTGAA AAACTGGTTG AAGCCGAGTC CCGCTACAAC
GACGCCCAGG CGGAGTACAA TATTCTGAAG AAGCGGCAGG ATTTTCTGGT GCAGAAGCTC
TCCGACGAGG AGAAGCAGAT CAGCGCCAGG ATCGCCAAAA ACGTCGATCA GCAGTCCATC
GACCTGAAGA GCCGCATCAA GAAGGAGGAA AAAGCCCTGA TCGAGCTGGC TAACAGCACC
GGTACAGAGG ACGGATCCTA CATTGCAAAA AAGCAGCAGC TCGACGTGCT CAAGCAGCGC
CTGCAGGAGC TCACCCGCAA CATGATCGCC GGTGAACTCT CCTACACCAG CCGTGCGCGC
CAGTTTCAGT TCGATCTTAT CTCCGAACAG CTCCAGACCG ACCTGCGCAT GGCTGAGCTC
GGCTATGTTG CCCAGGAGTA CCTGCGAGCC AAGAACTACT ACGAAAGCCA GCTCAACCGC
CTGCCGCAGA AGCAGCTCAA CTACGCCCGT CTCCAGCGCG ACAGGGAGGT GCTCAACAAC
ACCTACACTT TCCTGAAAGA GAAACTCGAA GAGTCGCGCA TCAAGATCGC CTCGGAAGTC
GGCAAGGTGG TCATCGTTGG CGCGGCCTAT CCTGAGCTTG CCCCTGTTGC TCCGTCGCTG
AAAAAGAATC TGCTCATCGG GCTGATCCTC GGTCTTGGCC TCGGCGGCGC GCTTGTCTTT
GTGCGCGAGA TGCTCGACCA CTCCCTCAAG GACGACAGCT TCCTCGAAGA CCACGGCTTC
ACCCCGCTTG CAGCCATTCC CTTTGTGGAT TCAGATGGGG GGGGGAGCAT GCAGGCCTCC
ATGAAGAAGT CGCTCAAAGA CTTTGCCAGC GTCTTCCCGT TCTTATCCGG CAACACAGAC
GGCAAAAAAG ATCAGCACCA GAAGAAAAAC AGTTACGGCA AACCGGTCGA ATCGACCCGA
AACAAGCAGC CGCTCCTCAT CGCAGACAGC CTTTCGTCTG CATTCGCTGA GTCATTCCGG
GATCTGCGAA CGAACATCAC TTTTTCGCAG GCCGATCGTA CGCTCAAATC AATCCTTGTC
ACCGGTACCG AGATCAGCGA AGGAAAGTCC ACGGTGTGCA CCAATCTCGC CTTCGCCTTT
GCGCTCACCG GCAAGAAAGT GCTTATCGTC GATTGCGACC TTCGCCGCCC CAGTCAGCAC
CGTAACCTCA ATACCATGAG GATGCCCGGT CTCTCCGATT ACCTCGCCGG GCAGGAAAAA
GATATCAATG CCGTTCTGCA GCCGACCATG CACGAGAACC TCTCCGTCCT CCCGGCCGGC
AGCCAGACCC CGAGCCCGAA CGAACTGCTC GGATCCAACA AAATGACCGA ACTCGTCAAA
AAGCTCGAAG AAGAGTGGGA CTACGTCATT CTCGACACCC CGCCAGTACT CCTGCTCAGC
GACGCAACCC TGCTCTCACG AACCGCCGAC GGCATCCTGA TGGTCGTCCG CATGGGCTAC
ACCAACAAAA ACCTCCTCAA AGAGGTTCAG AAACTCGACT ATCTCAAACA CCGCCTCCTC
GGAGTAGCCA TCATCGGCCC CTCCGACAAA TCCGGCTACA GCAACTACGG CCGCTACTAC
GGCCGCTACG GCTACAAAGG ATACTACAGC TACAAATCCT ACAACGCCTA CCTCGAACCG
GAGAAAGGGT GA
 
Protein sequence
MTNNDPNQFE QEINIQELLQ VLWNNKLIIG AVTGLVVMLV LLYHFSATPE YRSTSMVLIK 
QDKGGAMGEM INPFGSLTGF DLQNDIELVK SFPLAEEVVR NLYTKKDRDT LQLFGERNYV
SPIGGLFGWL SFGGAAEKDS VDYDVQMRKY AAALQERIKV GNSRDTDILN VSVSSPFPEE
AALLTNAICQ AYMRKDIEWN ADQAMSVKEF VGEQLAQQQR EISSVENKLS SYMKNQNIYE
LTGNAEKLLE KLVEAESRYN DAQAEYNILK KRQDFLVQKL SDEEKQISAR IAKNVDQQSI
DLKSRIKKEE KALIELANST GTEDGSYIAK KQQLDVLKQR LQELTRNMIA GELSYTSRAR
QFQFDLISEQ LQTDLRMAEL GYVAQEYLRA KNYYESQLNR LPQKQLNYAR LQRDREVLNN
TYTFLKEKLE ESRIKIASEV GKVVIVGAAY PELAPVAPSL KKNLLIGLIL GLGLGGALVF
VREMLDHSLK DDSFLEDHGF TPLAAIPFVD SDGGGSMQAS MKKSLKDFAS VFPFLSGNTD
GKKDQHQKKN SYGKPVESTR NKQPLLIADS LSSAFAESFR DLRTNITFSQ ADRTLKSILV
TGTEISEGKS TVCTNLAFAF ALTGKKVLIV DCDLRRPSQH RNLNTMRMPG LSDYLAGQEK
DINAVLQPTM HENLSVLPAG SQTPSPNELL GSNKMTELVK KLEEEWDYVI LDTPPVLLLS
DATLLSRTAD GILMVVRMGY TNKNLLKEVQ KLDYLKHRLL GVAIIGPSDK SGYSNYGRYY
GRYGYKGYYS YKSYNAYLEP EKG