Gene Paes_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1743 
Symbol 
ID6460404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1904203 
End bp1904766 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content38% 
IMG OID642725732 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_002016408 
Protein GI194334548 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.261083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA GTGTTAGAGC GGCCTTTATT GATAGAGATG GCGTTATCAA CGAGGAGCGT 
AATTATGTTT ATAAAATTCA GGATTTTGTT CTTCTTCCTG GTGTATTAGA GGCTTTAAAG
ATTTTTCAGG ATACCGGTTT TCTATTAATT GTTGTTACAA ATCAAGCAGG CATAGCTCGC
GGGTATTATG ATTCAAAAGC AGTTGAGGAA CTCCATTTTT ATATGAGATC ATTGTTTAGT
GATTCGGGTA TTATGATTGA TAAAATTTAT TATTGCCCGC ATCACCGCGA GGGAATAGTA
AAGAAATATG CGATTGATTG TAATTGTCGT AAGCCTGCTC CTGGGATGTT AATTCAGGCA
GTAAACGAAT TTAATATAAA TACAGCTCAA AGTGTTCTGA TAGGAGATAA AATCAGTGAT
ATTCAGGCAG GGAGGCGTGC AGGTGTAGGA TGTAATGTTT TGGTTGAGTC AGGTCATCCA
TTTGAGACTT CGACACGATT TCTTGCGGAT TATGTTGTTG CTGATTTGCT TGCTGCTGCT
CAACTTTTTT CAATGCGTAG TTAA
 
Protein sequence
MASSVRAAFI DRDGVINEER NYVYKIQDFV LLPGVLEALK IFQDTGFLLI VVTNQAGIAR 
GYYDSKAVEE LHFYMRSLFS DSGIMIDKIY YCPHHREGIV KKYAIDCNCR KPAPGMLIQA
VNEFNINTAQ SVLIGDKISD IQAGRRAGVG CNVLVESGHP FETSTRFLAD YVVADLLAAA
QLFSMRS