Gene Paes_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1722 
Symbol 
ID6459791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1879734 
End bp1880237 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content46% 
IMG OID642725711 
Producthypothetical protein 
Protein accessionYP_002016387 
Protein GI194334527 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000228174 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTA AATATTCTGT GTCGGCGATG GTTGCGGTGT TCATCTTTTC AGCTTTTTCT 
GCTCTGAGCA CTTATGCCAA TGATTCGGCT GGTAAGGCTC GCTATGATGG TGATGTTCAT
GTTGCTGCAG CAGAGTCTAT GGGTGACGAT TGTGAGGTGA TGCATTATGA TTATGCTGAT
CAAATGTACT ATGATGTCTA TACGGCACCG GGATCCGAAA CGGTTATTCA GCTTGAGCCG
GGAGAAAGGA TTGTCCAGCC GGTCTATCTG CAGAGTCCTG AGAATTGGGA TGTTTCGGTG
AAGGATGTGC AGCAGGATGG ACAGTTCTGC CAGCATGTTG CTGTAACGTG TTCTGAATGT
GCCAGCCGCA GTATTATGGA GATTGCGACG GACAGACGCT CTTATATTAT TGATCTGAAC
AGTTTTGAAG GCTCGTACAT GCAGGTTGTG AAGTGGAATT ATCTGCATGA GACTTCTCAT
CAGACCTATG CTGAGAACCG TTAA
 
Protein sequence
MNSKYSVSAM VAVFIFSAFS ALSTYANDSA GKARYDGDVH VAAAESMGDD CEVMHYDYAD 
QMYYDVYTAP GSETVIQLEP GERIVQPVYL QSPENWDVSV KDVQQDGQFC QHVAVTCSEC
ASRSIMEIAT DRRSYIIDLN SFEGSYMQVV KWNYLHETSH QTYAENR