| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1717 |
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| Symbol | |
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| ID | 6458563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1874881 |
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| End bp | 1877340 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725706 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_002016382 |
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| Protein GI | 194334522 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATC TGAAAGAGTA CAGGGAGCCG ACGACACGAC TTCCGGATTT TCTCCCCTGG
GCTGCACTTG TTGCTCCCGG AGTGGTATTG CAGAAGGATC GTTGTCTGCA GAAAACCATG
GGGTTCAGGG GGCCTGATCT GGCAAGTTCA TCGGCATCGG AGCTTGCTTC TTCGGTCGCC
CGTTTGAACA ACGCTTTGAA GCGTTTGGGC AGCGGGTGGT CGTTTTTTAT CGAAGCGCAG
CGTTTTGAGA GTTCCCGTTA TCCGTCTTCT TCATGGGTTC ATCCTGTGGC CTGGCTGGTG
GATCTTGAAC GGCGGGAGCA GTTTTCGGAA GCTGGAGCTC ATTTTGAGTC TTCTTATTTC
ATGACGTTGG TCTGGCAGTT GCCGGGTGAG CAGTCGACGC GTTTGAACGG TGTGTTTTAT
GATGATCCTC TTCGTCGCGA TGAGGTGATG GATAACGATC GTGATCTTGA GTTTTTTGTC
AAGGGGGTAA GGGAGATCAT GGACATCATG AGCGGTGTCT TTGTGGAGGT GAGGGAACTG
AACGATGATG AGACGCTGAG CTATCTGCAT AGTACGGTTT CGACAAACCG CCATCCTGTT
CTGGCCCCGG ATGTCCCTAT GTATCTTGAC GCACTGATTC CGGATCAGGC ATTTACGAAC
GGTGATATTC CGATGCTTGG CGATGCATTT ATTCCGACCT GCACGTTTTC GGGCTTTCCT
TCAACGTCTC TGCCGGGGAT TCTTGATGAT CTGAACCATC TCAGAATTGA GTATCGCTGG
GTGTGCCGCT TTCTCTGTCT TGATAAGGCT GATGCCAAAC GGGAGTTGGA GAAGTACCGA
AAGCGGTGGT GGCAGAAGCG CAAGTCGTTG TTTACGCTGT TGAAGGAGGA GGCTGCCAAG
CAGGAGTCGG CTCTTCTGGA TAGCGACGCG GCCAATAAGG CGGCCGATGC TGATGCTGCT
TTGCAGGAGC TTGGAGAGGA TATGGTCGCT TACGGGTATC TGACCTGCAC GGTGACGGTG
CAGCATCCGG ATCTTGACGA GGCGATGCGG CGAATACGGC TGGTCAAGCA GGTTGTTCAG
GGGCGGGGTT TTGTGGTGAA AGATGAGACG CTTAACAGCA GGGAGGCCTG GCTGGGAAGT
ATTCCGGGGC ATGTGTATGC CAATGTCCGG CGTCCGCTGG TCAATACGCT GAACCTTGCG
CATATGATGC CGTTATCGGC TATATGGGCG GGTAGTGATG AGAATACGCA TTTGAAGGAG
GTGTGCGGTT GCGGGACGCC TCATGTTCTG TGTTCGACGA CAGGAAGTAC GCCGTTCAGG
CTGAACCTGC ATGTCGGCGA TGTGGGCCAT ACGCTGGTTG TGGGGCCTAC AGGTGCGGGA
AAGTCGACGC TGTTGGGATT GCTTGAGCTG CAATGGCTTC GATATCCTGG TGCCAGAGTG
GTGATTTTTG ATAAGGATCG GTCGGCTCGG GCTGCGACGA TGGCTCTTCA GGGGGCATAT
TATGAGCCGG GGGGTGAGAT GGCACCGTTG GCGTTTCAGC CATTTCTTGG TATTGACAGG
GTTCAGGAGC GCATATGGAC TTCAGGGTTT GTGATGCTGC TGCTGCGTGA GCAGGGTGTG
GCTGAGCAGC CTGCGTTGAA GAAGGAGATC GATATGGCGC TTGAGAGCCT TGCGTCGAGT
GAAAGGGATC ATCGGACGAT GACGGTGTTT TGTGATCTGG TGCAGTCGAG AGAGGTTCGT
GATGCGTTGA GACCGTATAC GGTTCAGGGA AATTATGGTC AGTTATTTGA TGCTGATTGC
GAGGATATGC AGCATGGGTT CTGGACCATG ATTGAGATGA ATTCTTTGAT GGCGCTGCCG
CAGGAAGCGC TTGTTCCTTC GCTTTCGTAT CTCTTTCATC GGGTTGAACA GGGATTTGAC
GGGAGCCCGA CTCTTCTGGT GCTTGACGAG GCGTGGCTTT TTCTGAAGCA TCCTGTTTTT
ATGGGTCAGC TTCAGAACTG GCTGAAGACG CTTCGTAAAA AGAATGTGTC GGTGGTTTTT
GCGACTCAGG AGGCTGCAGA TGCAGCAGAG TCTCCGATTA TGGCGACGAT TCTCTCTGCC
TGCCATACGA AGATTTTCCT TCCGGATGAG GAGGCGATGA CGCCGGGGAT GAAACGCGCG
TATCAGGCTT TTGGATTGAC TGAAACGGAG ACTGCTCTTC TTGCTGGTGC ACAGAAAAAA
CGGGATTACT ATTACCGGTC ACCTTACGGG CGAAGGATGT TTTCTCTGAA TATGGGACCT
GTTGCGCTGA CATTTACCGG GCTGTCTTCA CCGGAGGATC AACGGTTTAT GGATAGGATG
TCTGTTGAAC AGGGAGCGGA GATGTACGCT GAGCTCCTTT TGCGTTACCG GGGACTTGAC
TGGGCGGCGG AGCTGCTTTC AGCTGCGCGG TCGGGTGAGT CGGATGTTTT TCAAACATGA
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| Protein sequence | MLNLKEYREP TTRLPDFLPW AALVAPGVVL QKDRCLQKTM GFRGPDLASS SASELASSVA
RLNNALKRLG SGWSFFIEAQ RFESSRYPSS SWVHPVAWLV DLERREQFSE AGAHFESSYF
MTLVWQLPGE QSTRLNGVFY DDPLRRDEVM DNDRDLEFFV KGVREIMDIM SGVFVEVREL
NDDETLSYLH STVSTNRHPV LAPDVPMYLD ALIPDQAFTN GDIPMLGDAF IPTCTFSGFP
STSLPGILDD LNHLRIEYRW VCRFLCLDKA DAKRELEKYR KRWWQKRKSL FTLLKEEAAK
QESALLDSDA ANKAADADAA LQELGEDMVA YGYLTCTVTV QHPDLDEAMR RIRLVKQVVQ
GRGFVVKDET LNSREAWLGS IPGHVYANVR RPLVNTLNLA HMMPLSAIWA GSDENTHLKE
VCGCGTPHVL CSTTGSTPFR LNLHVGDVGH TLVVGPTGAG KSTLLGLLEL QWLRYPGARV
VIFDKDRSAR AATMALQGAY YEPGGEMAPL AFQPFLGIDR VQERIWTSGF VMLLLREQGV
AEQPALKKEI DMALESLASS ERDHRTMTVF CDLVQSREVR DALRPYTVQG NYGQLFDADC
EDMQHGFWTM IEMNSLMALP QEALVPSLSY LFHRVEQGFD GSPTLLVLDE AWLFLKHPVF
MGQLQNWLKT LRKKNVSVVF ATQEAADAAE SPIMATILSA CHTKIFLPDE EAMTPGMKRA
YQAFGLTETE TALLAGAQKK RDYYYRSPYG RRMFSLNMGP VALTFTGLSS PEDQRFMDRM
SVEQGAEMYA ELLLRYRGLD WAAELLSAAR SGESDVFQT
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