| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1712 |
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| Symbol | |
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| ID | 6460058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1871005 |
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| End bp | 1871949 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725701 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_002016377 |
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| Protein GI | 194334517 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000367277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA GGTATATGGT TTCTTCTGGA TTGCTTGCGC TGTGTATGGC GAGTTCGGGA
TGCAGTCAGG CGGCTGAAGG GACATTTGTG GAGGCTTCTC CTGTTGCAGA TCGGATGCAG
GTGGCGGCGC CTGAGGTTGC GCATTCTTTG CTATCGGAAA ACAGGCTGCT GCGGATTCCT
GGAGATGATG AGCGTCGGCC GGTAGCGGGT AAGCCATGGG AGGTTATTGA CGCGGCAAAT
CGTTCGGCTG CACAGAATCC CGATAGTGCG GGGTACTTTA ATGCGATTAT GCTCTATGAT
TATGTGCCTG GAAGTTTGTT TCAGGTGTAT GCAGCTCCTT TGCGTTTGAC CGATATTCAG
TTGCAGCCGG GGGAGAAAAT TGTGGGACAA CCTGCTGCTG GTGATACGGT TCGCTGGATT
CTCGGAATCG GGCGCAGTAG AATTGATGGT CAGGAGCAGC AGCATGTGTA TGTGAAAGCA
ACCAGACCGG GATTGGAGAC GACACTTGTG ATTACGACGG ACCGTCGGAC CTATCATCTT
GAGTTGCACA GTTATCGGGA AACTTACATG GCTGCAGTGC AGTGGCGTTA CCCGCAGGAG
GAACTTCGCG TACCGGGAGC TGGGGCGGGG GAAGATGTCG TTGCTTCCGG GGTGGATATC
CGTCAACTGA ATTTCGGGTA TGATGTCGAT GTTCGCAAGG GAGGCCGTCC TTCGTGGATG
CCGTTGAAGG TGTTTGATGA TGGGCGCAAG ACGTTTATTC AATTCCCTGA TTCTATGTTG
GCTGGTGAAG CGCCTGTGCT GTTTGTGGTG TCACGGGAGG GTGATTCGCA ACTGGTGAAT
TATCGGGTTA AAGATGAGTT TTTTGTGGTT GACCGGTTGT TTGAGGAGGC GGAACTGCGC
ATTGGCAGGA AACGCCAGAA TGTGGTCAGG ATCAGTCGCT TGTAG
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| Protein sequence | MSKRYMVSSG LLALCMASSG CSQAAEGTFV EASPVADRMQ VAAPEVAHSL LSENRLLRIP
GDDERRPVAG KPWEVIDAAN RSAAQNPDSA GYFNAIMLYD YVPGSLFQVY AAPLRLTDIQ
LQPGEKIVGQ PAAGDTVRWI LGIGRSRIDG QEQQHVYVKA TRPGLETTLV ITTDRRTYHL
ELHSYRETYM AAVQWRYPQE ELRVPGAGAG EDVVASGVDI RQLNFGYDVD VRKGGRPSWM
PLKVFDDGRK TFIQFPDSML AGEAPVLFVV SREGDSQLVN YRVKDEFFVV DRLFEEAELR
IGRKRQNVVR ISRL
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