Gene Paes_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1708 
Symbol 
ID6459338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1865151 
End bp1865591 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content45% 
IMG OID642725697 
Producttranscriptional regulator, TraR/DksA family 
Protein accessionYP_002016373 
Protein GI194334513 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000577167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA AAAGCAGTAG AACCATGAAA TTGGAAGCAG AGGCCCCGAT TGCTCCGGGT 
AAAGTTCTTC ATACCTATCT GAACGATGAA GAGCTTGAGC ATTTCAGGGA ATTACTTTTG
AAACGCAGGG AAGAGGTGTT GCGCGATCTT GATATTTTGC GATCATCCCT TTCTGAGGAG
AGTGTTGAGG ATTCGATTAA CTCGAATTAT TCGATGCATA TGGCAGATCA TGGTACTGAA
ACTATGGACC GAGAGCAGCG ATTCATGTTC ATTGCCCGTG ATGAAAAGTA CCTTGGCTAT
ATCGATCAGG CGCTTGAACG TATTCGCAAT AAAACGTATG GCGTGTGTGT CAAGTCAGGC
AAGCCGATTC CGAAGAAGCG TCTCGAAGCT GTTCCGCATA CTTCTGTTCG GATCGAGTTC
AAGGAGAATA AGAAAAAATA G
 
Protein sequence
MPKKSSRTMK LEAEAPIAPG KVLHTYLNDE ELEHFRELLL KRREEVLRDL DILRSSLSEE 
SVEDSINSNY SMHMADHGTE TMDREQRFMF IARDEKYLGY IDQALERIRN KTYGVCVKSG
KPIPKKRLEA VPHTSVRIEF KENKKK