| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1704 |
|---|
| Symbol | |
|---|
| ID | 6458383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1859904 |
|---|
| End bp | 1860755 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642725692 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_002016369 |
|---|
| Protein GI | 194334509 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAA TCGGCGCACA TGTCAGCATC GCAGGAGGTA TAGAAAACGC CCCGATGAGA
GCCAGAGAGA TCGGCGCAAC AGCATTTGCC ATGTTTACCA AAAACCAGCG ACAGTGGAAT
GCTCCGCCAC TGACCACGCA GAGCATCGAT GCGTTCAAAA ACAACTGCGC AGAATGCGGC
TACCATGCCC GTCATATCCT CCCTCACGAC AGCTATCTCA TCAACCTCGG CAGCCCCGAT
CCGGCAAAGC TGGAACGCTC CCGAAAAGCC TTCACCGATG AAATGCAGCG CGTCGAAGCA
CTCGGTCTTT CACTGCTTAA TTTTCACCCG GGCAGCCATC TCAATGAAAC CGGTATCGAC
AATTGTCTGA ACACCATCGC AGAGTCGGTC AACATCGCCC TCGACAACTC AAGCGGCGTA
ACAGCCGTGC TGGAAAATAC CGCAGGACAA GGTTCAAACC TCGGCCACAC CTTTGAACAG
CTTGCAGCAA TTATCGATCA GATAGAAGAC AAAACACGGG TTGGAGTATG CCTCGACACC
TGCCATCTCT TTGCGGCAGG ATATGACCTT CGTACCAGCG AAGCAGTTGA AGCAACCTTC
AATGAATTTG ACAGCATTGT CAGCCTCAGC TATCTGAGAG GAATGCACCT CAATGATGCA
AAACTCGATC TGGGAAGCAA ACGGGACCGG CACGAAAGCA TCGGCAGCGG CTTTATCGGC
AACGACGGGT TTGCCGCCAT TATCCAGCAT CCCGCATGCG ACGAAATCCC GCTGATCCTC
GAAACCCCGA ATCCCGATAT CTGGAACCGT GAAATCGAGA TGCTCTACCA GATGGAAGGT
GACAAACGCT AA
|
|---|
| Protein sequence | MRRIGAHVSI AGGIENAPMR AREIGATAFA MFTKNQRQWN APPLTTQSID AFKNNCAECG
YHARHILPHD SYLINLGSPD PAKLERSRKA FTDEMQRVEA LGLSLLNFHP GSHLNETGID
NCLNTIAESV NIALDNSSGV TAVLENTAGQ GSNLGHTFEQ LAAIIDQIED KTRVGVCLDT
CHLFAAGYDL RTSEAVEATF NEFDSIVSLS YLRGMHLNDA KLDLGSKRDR HESIGSGFIG
NDGFAAIIQH PACDEIPLIL ETPNPDIWNR EIEMLYQMEG DKR
|
|---|
| |