Gene Paes_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1697 
Symbol 
ID6459656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1850870 
End bp1852015 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content53% 
IMG OID642725685 
Productbeta-lactamase 
Protein accessionYP_002016362 
Protein GI194334502 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.570462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACC GATTGCTCAT CACAATCACC TGCCTCTGCC TGCTCTGCGC AAAACCCGCA 
CCCTCAGTAG CTGCAGACCC ATTCAAAGCA GTTGACAACC TCGTCAACGA GTCCATCAGG
GACGGCGTAT TCCCGTCAGC AAGCATAGCC GTCATCCACA AAGGCACGGT TGTTTACCAC
CGCGCCTTCG GAAAGCAGAC ATACGACAGA CAATCTCCCC CGGTCACAAC AACAACCATC
TATGATCTTG CATCGCTGAC CAAGCCCATC GTCACCACCT CCATTGCCAT GCAGCTTGTC
GAACATGACT CCCTCGATAT CAATGCACCC GTCTCGCACT ATCTGCCCGG CTTCGCTCGC
AACGGCAAAG AAAAGATCAC CATCAAAAAT CTGCTCCTGC ATAACTCAGG CCTCAGAGCG
CACCGATTCT TCATCGAAAG CTGTAAGACA CCTGACGAGG TCTACGAAGC CATTTCAGAC
GAAACACCAA TCGTTCCGAC AGGCAGCAAA ACCATCTACA GCGACCTCGG CTTCATCACT
CTCGGCAACG TCATCGAAAC CATCACAGCA AACACACTTG AAGAAAACTT TTCCGCACGT
TTCTCGGTGC CGCTCGGCAT GCACAGCACC CTGTTCACAC CGTCGTTAAC AATGCTGAAA
AACATAGCGC CCACAGAAAA AGACTCCCGG TGGACGCTCG ACATCCCGAG ACCACTCGTT
CACGATCATA ACGCAGCACT CCTCAGGGGC GTAGCAGGTC ACGCCGGCCT CTTCTCGACA
ACCGGAGACC TTATTATTTT CGCAACAATG CTCATGCAGC ACGGCAGCTA TGGAGGGAAG
GCGTTTTTCA AACCAGAAAC CATTACCACC TTTACCCAAC GCCATCCGGG ATCCAGAGCG
CTCGGCTGGG ATCTGCGTTC CATAGACGGA CCATCATCGT CAGGCGACCA CTTCTCCGCA
AAAGCCTACG GTCACCTCGG CTTCACCGGC ACAAGCATCT GGATTGATCC GGAAAAAGAT
CTTGCCGTCA TCACCCTGAC CAACAGGGTC TATCCAACCT CAGACAACAT CAAAATTCGC
AAATTCCGCC CCAAGCTCCA CAACACCGTC ATAGAATGCC TCGGACTTAG GGGGGGGAAG
AAGTGA
 
Protein sequence
MFNRLLITIT CLCLLCAKPA PSVAADPFKA VDNLVNESIR DGVFPSASIA VIHKGTVVYH 
RAFGKQTYDR QSPPVTTTTI YDLASLTKPI VTTSIAMQLV EHDSLDINAP VSHYLPGFAR
NGKEKITIKN LLLHNSGLRA HRFFIESCKT PDEVYEAISD ETPIVPTGSK TIYSDLGFIT
LGNVIETITA NTLEENFSAR FSVPLGMHST LFTPSLTMLK NIAPTEKDSR WTLDIPRPLV
HDHNAALLRG VAGHAGLFST TGDLIIFATM LMQHGSYGGK AFFKPETITT FTQRHPGSRA
LGWDLRSIDG PSSSGDHFSA KAYGHLGFTG TSIWIDPEKD LAVITLTNRV YPTSDNIKIR
KFRPKLHNTV IECLGLRGGK K