Gene Paes_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1696 
Symbol 
ID6459287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1849894 
End bp1850775 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content50% 
IMG OID642725684 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002016361 
Protein GI194334501 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACC CGAATACACT GAAGTGGACA GACGTCAAAA CCGGCATTTT TTTCGTCATT 
GGCATAGGCC TCGCCGCTTA TCTCGGGCTC GTTGTCGGTA AAAACTCCAG CCTGTTCAAA
AGCGAAACCG TCATCAATAT GCTGGCTACC GATGTCGAAA GCCTTGCCGA AAACAACTTC
GTCTCCCTTT CCGGCAAAAA AATCGGCACC GTTTCATCAC TTGAATTCGT CGAACAGAAC
GACTCCCTGT TCGTGCTCAT ACAGATGAAG CTGCAGAACG AGTTTGCAGG AATCGTCACC
CAGGACTCCA AAGCAAGCAT CCAGTCCCTC GGTATCCTCG GCGATAAATA CATCGACATC
ACAACAGGTA GCGGAATGCC GGTTAACAAC GGTGACTACA TTACTATCGA AGCAGCCGAA
GGAGGAATGG CAAGCCTTAT GACAAATGCA GGCAAAGCAT TGAGCCAGAT AGACGAACTC
CTGACAAAAG TCAATGAAGG CAACGGCCCC CTGGCAAAAC TTCTCGGATC GGAAGATATG
GCGTCCGAAC TCGAAGAGAC CGTTACGAAT CTCAAAAATG TCTCGCAGGA ACTGACCAGC
TTCACCCGGG AACTCAACAA CGGCGGCGGA CTTCTGCCGC AGCTCATGAA CAATGAAGAA
CTTGCCGGCA AAGTCAAAAA CGCTGTCGTC AGCTTCAACA CCGTTGCATC GCGCACTGAC
TCCCTGATGC AGAAACTCAA CAGCGATCAA GGAACCATCG GACAACTGCA CTCCAATCCG
GCGCTCTATT CGAACCTCAA CGAGAGCCTC GAATCGCTCG ACTCACTGCT GATGGACCTT
AAAGACAACC CGAAACGTTA CGTACGTTTT TCACTGTTCT GA
 
Protein sequence
MRNPNTLKWT DVKTGIFFVI GIGLAAYLGL VVGKNSSLFK SETVINMLAT DVESLAENNF 
VSLSGKKIGT VSSLEFVEQN DSLFVLIQMK LQNEFAGIVT QDSKASIQSL GILGDKYIDI
TTGSGMPVNN GDYITIEAAE GGMASLMTNA GKALSQIDEL LTKVNEGNGP LAKLLGSEDM
ASELEETVTN LKNVSQELTS FTRELNNGGG LLPQLMNNEE LAGKVKNAVV SFNTVASRTD
SLMQKLNSDQ GTIGQLHSNP ALYSNLNESL ESLDSLLMDL KDNPKRYVRF SLF