Gene Paes_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1688 
Symbol 
ID6459605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1841288 
End bp1841878 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content46% 
IMG OID642725676 
ProductCDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_002016353 
Protein GI194334493 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.124602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC CGAACCAGTT GACCATATTA CGCATTGTGC TTGTACCTGT TTTTGTGTAT 
CTGCTGATGC TTTCTTCACC TCTTATGAAG CTTTTCGGGG TGGTCGTTTT CATCATTGCT
TCGGTGACTG ATGCCTATGA TGGCTATCAT GCCAGGAAAT ACGGGGAGAC GACCCGACTT
GGAGCGTTCC TTGATCCCCT TGCCGACAAG TTTCTCATTA CGGCCGCTTT TCTTGTCTAT
GTGTGGTACG GCTATCTTGA TTTGTGGATG GTTGTTCTTG TGGCTTTGCG TGATATCGTG
GTTACCGTTC TGAGAGTCTA TGCTGAATGG AAGGACCGCC CTGTCGTTAC AAGCAGTGAA
GCGAAATACA AGACGCTTTC ACAGAACATT TTTGCCTATG TGATTATGCT GTTTATGCTT
CTTGCAGAGC CAACCTTTAC GGGCGCAGCT GTTGCTTCAC GTATGAGAGA GGTTCTCTTT
GCAGACTACC TTGATTATAT CATGCTTGCG ATTACGCTCT TTACGGTTTA TACAGGGGTG
TCGTATCTTT TGCAGAACAG GAAGCATCTA ATGGAGAAGA CGACGTCATG A
 
Protein sequence
MTLPNQLTIL RIVLVPVFVY LLMLSSPLMK LFGVVVFIIA SVTDAYDGYH ARKYGETTRL 
GAFLDPLADK FLITAAFLVY VWYGYLDLWM VVLVALRDIV VTVLRVYAEW KDRPVVTSSE
AKYKTLSQNI FAYVIMLFML LAEPTFTGAA VASRMREVLF ADYLDYIMLA ITLFTVYTGV
SYLLQNRKHL MEKTTS