Gene Paes_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1684 
Symbol 
ID6459390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1836466 
End bp1837911 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content47% 
IMG OID642725672 
Productalpha amylase catalytic region 
Protein accessionYP_002016349 
Protein GI194334489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAC TTGTTTATGA AATCAATACG AGAGTGTGGC TTCGTCACCT TTCGGAACAG 
TATCAGCGGC CTATTACGCT TGGCAATATT CCTGACAGCG AGTTCAGGTT TTTCAAACAC
TCGGGTTTTG ATTTCATCTG GTTGATGGGG ATATGGCGGC CGAGTAGGTA CAGCGAGGCG
ATTGCCCGTT CGCATCGCGG ACTTCGTTCT GTTTTTCTGG AACAGATTGA CCATCCTGAT
CCATGCGATA TTGTTGCTTC TCCGTATTCT ATCCCTGAAT ACCGGATCAA TCCCCTGCTT
GGCGATGAGT CGGAGCTGGC AGAGTTGCGA AAGCGTCTGG CAGCGGATGA TATTCGGCTG
ATGCTTGATT TTGTGCCCAA TCACATGGCC CTTGACAACA AGTGGTTGCC GGACCATCCT
GAATTTTTCG TTACGGTTTC GTCTGAGGAG CAGTGCATCG ATCCTGAATC CTGTTTCGAG
TATCGTCATA ACCATTTTCT TGCTCACGGC AAAGATCCGT ATTTCCCTTC ATGGACCGAT
ACGCTCCAGC TTAATTACTC GCATTTTGCC ACTCACAACA TGATGACTGA AAACCTCATG
ACGATCGCTC AACAGTGCGA CGCTGTTCGT TGTGATGTGG CAATGCTCGA GCTCAAATCG
GTTTATGATA CAACGTGGGG GTCGCTGAGC GGACCTATGC CGGAGGAGTT CTGGGGCAAA
GCCATCAGTG CGGTTAAACA GTTGTTTCCT GATTTTATTT TTCTTGCCGA ATCATATTGG
GACAAGGAGT GGGAACTGCA GCAGCAGGGG TTTGATTTTA CCTATGATAA ACCGTTTTAC
GATTATATGA CCGCTCATCC GGTTGCGATA ACCAGATTGA AAGGGCATCT GGAGGCTGAA
TGGAATTATC AGTCACATCT GTGCCGTTTT CTTGAGAACC ATGATGAGGC GCGGGCGGCA
ACAAAACTTG GTCCCAACCA TCTGCCGGCA GCTCTCGTTC TCATGACGGT TCCAGGGATG
CATCTTATTC ATCAGGGGCA GCTCGAAGGC TACAGACTGC AGCTTCCGGT CCAGCTTCTC
CGCCAGGCAA GCGAACCGTT TAACAGCGAA CTCCCTGAGG TCTATCATGA GATATTTATG
TTGTCGAAAC ATGATGTGTT TCGGAAGGGA GACATCGAAC ATTTGGATAT CAATGTCCAT
GAAACAAGTA ACTGTATAGG TTTTCGGAGA TTTTCAGGGC AACAATCTGC TTTTGTGCTT
GCAAACTTTA CGTCTACCGG GATCGATATC AGCTTTTCTC ATAATCATTT CACCTCCGAT
ACGTCTTTAG TCTTCAAGGT ATTCAGTACT CAACATCAGC AAAAAAATAT TGATTTTGTT
GCTGATGAGC ATCGGGTCAG AGTGAAGCTT TCACCCCACG AGGGTCTTGT TCTTGAATGC
GGGTAG
 
Protein sequence
MFPLVYEINT RVWLRHLSEQ YQRPITLGNI PDSEFRFFKH SGFDFIWLMG IWRPSRYSEA 
IARSHRGLRS VFLEQIDHPD PCDIVASPYS IPEYRINPLL GDESELAELR KRLAADDIRL
MLDFVPNHMA LDNKWLPDHP EFFVTVSSEE QCIDPESCFE YRHNHFLAHG KDPYFPSWTD
TLQLNYSHFA THNMMTENLM TIAQQCDAVR CDVAMLELKS VYDTTWGSLS GPMPEEFWGK
AISAVKQLFP DFIFLAESYW DKEWELQQQG FDFTYDKPFY DYMTAHPVAI TRLKGHLEAE
WNYQSHLCRF LENHDEARAA TKLGPNHLPA ALVLMTVPGM HLIHQGQLEG YRLQLPVQLL
RQASEPFNSE LPEVYHEIFM LSKHDVFRKG DIEHLDINVH ETSNCIGFRR FSGQQSAFVL
ANFTSTGIDI SFSHNHFTSD TSLVFKVFST QHQQKNIDFV ADEHRVRVKL SPHEGLVLEC
G