Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1684 |
Symbol | |
ID | 6459390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1836466 |
End bp | 1837911 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642725672 |
Product | alpha amylase catalytic region |
Protein accession | YP_002016349 |
Protein GI | 194334489 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAC TTGTTTATGA AATCAATACG AGAGTGTGGC TTCGTCACCT TTCGGAACAG TATCAGCGGC CTATTACGCT TGGCAATATT CCTGACAGCG AGTTCAGGTT TTTCAAACAC TCGGGTTTTG ATTTCATCTG GTTGATGGGG ATATGGCGGC CGAGTAGGTA CAGCGAGGCG ATTGCCCGTT CGCATCGCGG ACTTCGTTCT GTTTTTCTGG AACAGATTGA CCATCCTGAT CCATGCGATA TTGTTGCTTC TCCGTATTCT ATCCCTGAAT ACCGGATCAA TCCCCTGCTT GGCGATGAGT CGGAGCTGGC AGAGTTGCGA AAGCGTCTGG CAGCGGATGA TATTCGGCTG ATGCTTGATT TTGTGCCCAA TCACATGGCC CTTGACAACA AGTGGTTGCC GGACCATCCT GAATTTTTCG TTACGGTTTC GTCTGAGGAG CAGTGCATCG ATCCTGAATC CTGTTTCGAG TATCGTCATA ACCATTTTCT TGCTCACGGC AAAGATCCGT ATTTCCCTTC ATGGACCGAT ACGCTCCAGC TTAATTACTC GCATTTTGCC ACTCACAACA TGATGACTGA AAACCTCATG ACGATCGCTC AACAGTGCGA CGCTGTTCGT TGTGATGTGG CAATGCTCGA GCTCAAATCG GTTTATGATA CAACGTGGGG GTCGCTGAGC GGACCTATGC CGGAGGAGTT CTGGGGCAAA GCCATCAGTG CGGTTAAACA GTTGTTTCCT GATTTTATTT TTCTTGCCGA ATCATATTGG GACAAGGAGT GGGAACTGCA GCAGCAGGGG TTTGATTTTA CCTATGATAA ACCGTTTTAC GATTATATGA CCGCTCATCC GGTTGCGATA ACCAGATTGA AAGGGCATCT GGAGGCTGAA TGGAATTATC AGTCACATCT GTGCCGTTTT CTTGAGAACC ATGATGAGGC GCGGGCGGCA ACAAAACTTG GTCCCAACCA TCTGCCGGCA GCTCTCGTTC TCATGACGGT TCCAGGGATG CATCTTATTC ATCAGGGGCA GCTCGAAGGC TACAGACTGC AGCTTCCGGT CCAGCTTCTC CGCCAGGCAA GCGAACCGTT TAACAGCGAA CTCCCTGAGG TCTATCATGA GATATTTATG TTGTCGAAAC ATGATGTGTT TCGGAAGGGA GACATCGAAC ATTTGGATAT CAATGTCCAT GAAACAAGTA ACTGTATAGG TTTTCGGAGA TTTTCAGGGC AACAATCTGC TTTTGTGCTT GCAAACTTTA CGTCTACCGG GATCGATATC AGCTTTTCTC ATAATCATTT CACCTCCGAT ACGTCTTTAG TCTTCAAGGT ATTCAGTACT CAACATCAGC AAAAAAATAT TGATTTTGTT GCTGATGAGC ATCGGGTCAG AGTGAAGCTT TCACCCCACG AGGGTCTTGT TCTTGAATGC GGGTAG
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Protein sequence | MFPLVYEINT RVWLRHLSEQ YQRPITLGNI PDSEFRFFKH SGFDFIWLMG IWRPSRYSEA IARSHRGLRS VFLEQIDHPD PCDIVASPYS IPEYRINPLL GDESELAELR KRLAADDIRL MLDFVPNHMA LDNKWLPDHP EFFVTVSSEE QCIDPESCFE YRHNHFLAHG KDPYFPSWTD TLQLNYSHFA THNMMTENLM TIAQQCDAVR CDVAMLELKS VYDTTWGSLS GPMPEEFWGK AISAVKQLFP DFIFLAESYW DKEWELQQQG FDFTYDKPFY DYMTAHPVAI TRLKGHLEAE WNYQSHLCRF LENHDEARAA TKLGPNHLPA ALVLMTVPGM HLIHQGQLEG YRLQLPVQLL RQASEPFNSE LPEVYHEIFM LSKHDVFRKG DIEHLDINVH ETSNCIGFRR FSGQQSAFVL ANFTSTGIDI SFSHNHFTSD TSLVFKVFST QHQQKNIDFV ADEHRVRVKL SPHEGLVLEC G
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