| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1677 |
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| Symbol | |
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| ID | 6460385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1826892 |
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| End bp | 1829111 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725665 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002016342 |
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| Protein GI | 194334482 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TCATCTATAC CAAAATCGAT GAGGCGCCGG CCCTTGCGAC CTACTCGCTG
CTGCCGATCA TTCAGGCATT TACCAGTGGT ACCGGTGTTG AAGTTGAAAC CCGTGATATC
TCCCTTGCCG GACGAATTAT CGCTAATTTT CCTGATAATC TGACCCCTGA ACAGCAGATC
CCTGATTATC TCTCCGAACT TGGCGAGCTT GCCAAGACCA AGGAGGCTAA TATCATAAAA
CTTCCGAACA TCAGCGCATC TATTCCTCAG CTGCAGGCTG CTATCAAGGA GCTTCAGTCG
AAAGGTTACA ATGTTCCTGA CTATCCTGAA GAACCGAAAA ACGATGCTGA AAAAGAGATC
AAAGTCCGTT ACGCCAAGGT TCTTGGCAGT GCGGTCAATC CGGTATTGCG TGAAGGCAAC
TCCGACAGGC GCGCAGCGGC TTCGGTCAAG CAGTATGCTC AGAACAATCC TCATCGTCTG
AGAGCGTGGG AATCCGGCTC TAAAGCCAGT GTTGCGTATA TGGAGAGCGG TGATTTTTAC
GAAACCGAAA AGTCGGCGAC CATGAACGGT GCCGATAGTG TTCGTATCGA GTATGTTGAC
GGTGATGGTA ACGTGACGGT GCTGAAAGAC AGTCTTTCGC TTCTTGATGG TGAAGTGATC
GATACCTCCA TCATGAACGT TCGTAAGCTT CGCGATTTTT ATGCGGCTCA GATTGAGCGG
TCGAAAAATG ATGATATGCT GCTTTCGCTG CACCTGAAAG CGACCATGAT GAAGGTTTCT
GACCCGATTA TGTTCGGTCA TGCTGTATTG GTTTTTTATA AGGATGTTTT TGACAAGCAT
GGCGACACAT TCAAAGCTCT TGGCGTCAAC GTGAATAACG GTCTTGGAGA TGTTTACGCA
AAGATCCAGT CTCTTCCTGA AGACAAGAGA GCTGAAATCG AAGCCGACAT CCAGGCTGTC
TACCCGAGCC GCCCGGCGCT TGCTATGGTT GATTCCGATA AAGGGATTAC CAACCTTCAT
GTTCCCAACG ATATCATCAT CGATGCCTCA ATGCCTGTCG TGATCCGTGA CGGCGGCAAA
ATGTGGGGTC CTGATGGTGA ACTGCATGAT ACAACGGCTA TGATTCCTGA TCGTTGTTAT
GCCACGATGT ATCAGGAGAT GATCGAAGAT TGTCAGAAAA ACGGTGCTTA TGATGTTTCC
ACCATGGGCA GCGTTTCCAA CGTCGGTCTG ATGGCTCAGA AAGCAGAAGA GTACGGCTCT
CATGACAAAA CCTTCGAGGC TCCGGGTGAT GGCGTCATTC GAGTGGTTGA CGGATCCGGA
AAGGCAATGC TTGAGCAGGT TGTCGAAACA GGCGATATTT ACAGAATGTG CCAGGTTAAG
GATGCTCCTA TCCGCGACTG GGTGAAGCTT GCTGTGAACA GAGCAAAAGC CACCGGCGTA
CCGGCTGTGT TCTGGCTTGA CAAAGAACGT GCTCATCACG TTCAGTTGAT TGAAAAAGTC
ACAGCCTATC TGAAAGAGCA CGATACCGAA GGACTCGATA TCAGAATCAT GTCTCCGGTA
GAAGCGATGC GCTTCTCGCT GGAACGCATC AGAGCGGGTA AGGATACCAT TTCGGTTACC
GGTAACGTTC TCAGAGATTA CCTGACTGAT CTTTTCCCGA TCCTTGAACT TGGCACCAGC
GCCAAAATGC TTTCTATCGT TCCGCTGATG AACGGCGGCG GTCTGTTTGA GACCGGTGCA
GGCGGTTCTG CTCCTAAACA TGTTCAGCAG TTTCTTAAAG AGGGTCATCT GAGATGGGAC
TCACTGGGTG AAATGCTTGC TCTTGGCGTT TCTCTTGAAC ATCTTGCCGC GGCATTCAAG
AACGATAAAG CCCAGGTTCT TGCTGACACG GTCGATCAGG CGGTCGGTCA GTATCTTGAA
AACAGAAAGT CTCCTTCTCG GAAAGTTAAC GAGATTGATA ACCGTGGAAG CCACTACTAT
TTCGCACTTT ATTGGGCACA GGCTCTTGCC GCACAGGACA AGGACCAGGA GCTCAAAGCG
AAGTTTGCAG GTATTGCTGA ATCGATGGCT GCCAGTGAGG CTGCTATCAT CGATGAGCTG
AACGCTGCAC AGGGCAGCGC GGTCGATGTC GATGGCTATT TCATGCCTGA CGATGAAAAA
GCTTCACAGG CAATGCGCCC GAGTGCTACC TTGAATGCAA TTATTGATGC GCTGAAGTAA
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| Protein sequence | MAKIIYTKID EAPALATYSL LPIIQAFTSG TGVEVETRDI SLAGRIIANF PDNLTPEQQI
PDYLSELGEL AKTKEANIIK LPNISASIPQ LQAAIKELQS KGYNVPDYPE EPKNDAEKEI
KVRYAKVLGS AVNPVLREGN SDRRAAASVK QYAQNNPHRL RAWESGSKAS VAYMESGDFY
ETEKSATMNG ADSVRIEYVD GDGNVTVLKD SLSLLDGEVI DTSIMNVRKL RDFYAAQIER
SKNDDMLLSL HLKATMMKVS DPIMFGHAVL VFYKDVFDKH GDTFKALGVN VNNGLGDVYA
KIQSLPEDKR AEIEADIQAV YPSRPALAMV DSDKGITNLH VPNDIIIDAS MPVVIRDGGK
MWGPDGELHD TTAMIPDRCY ATMYQEMIED CQKNGAYDVS TMGSVSNVGL MAQKAEEYGS
HDKTFEAPGD GVIRVVDGSG KAMLEQVVET GDIYRMCQVK DAPIRDWVKL AVNRAKATGV
PAVFWLDKER AHHVQLIEKV TAYLKEHDTE GLDIRIMSPV EAMRFSLERI RAGKDTISVT
GNVLRDYLTD LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHVQQ FLKEGHLRWD
SLGEMLALGV SLEHLAAAFK NDKAQVLADT VDQAVGQYLE NRKSPSRKVN EIDNRGSHYY
FALYWAQALA AQDKDQELKA KFAGIAESMA ASEAAIIDEL NAAQGSAVDV DGYFMPDDEK
ASQAMRPSAT LNAIIDALK
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