Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1676 |
Symbol | |
ID | 6459743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1825596 |
End bp | 1826468 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725664 |
Product | Pirin domain protein |
Protein accession | YP_002016341 |
Protein GI | 194334481 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.105924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAC CAAGAACAAT CCGCAAAGTG TTCAAAAGCA AACCGGTAAC CGAAGGCGCA GGAGTACAGC TGAAACGTGC ATTCGGGTTC AGTGAATCCC CACTTTTCGA TCCCTTTCTC CTCCTTGACG ACTTCAGATC AGACAATCCG GACGACTATC TTGCAGGGTT TCCCCGCCAT CCACACAGAG GCATCGAAAC CATAACCTAC CTGCTGGAAG GCCACGTCGA ACATCGCGAC AGCCTGGGCA ACAGCGGCAG GATCAATGCA GGAGATGTTC AGTGGATGAC TGCCGGAAGC GGGATCATCC ATGAAGAAAT GCCCGTCGGC AGCAGCAGAG GCGGCATCGC CGGCTTTCAA GTATGGGCAA ACCTGCCAGC ATCTCAGAAA ATGACACCCC CACGCTACCG TGATATCAGC GCAGAGATGA TTCCGGAAGT TCATCTTGAC AACCAGATCT CGCTCAGGGT TATTGCCGGA GAGATTGAAG GCATTAAAGG TCCGGCAGAT GACATTGCCA TCGATCCGGT CTTTCTCGAT ATCATCATTC CTCCCGAAAC GGCAGCAGAT TTCCCGGTCA ATCCAGCCCA CTCAGCAGCA GCGTATATCA TAGGCGGCAG TGCCACATTC AGTCACGACA TGCAAGACAT GAATGCCTCA GCAAGTCCAG GCAATGAAAC CGTACTGCTC TTCAACACCG ACGGCGACCA CCTGCATATC GTTACCCACG AGGAATCCGT CAGGTTTCTC TTCTTATCAG CAAAACCGCT CAACGAACCT GTAGCCTGGC ACGGCCCCAT TGTCATGAAC ACAAACCACG AACTCCAGAA AGCCTTTGAA GACTATGAGA ACGGAACGTT TATCAAGGAA TAA
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Protein sequence | MHQPRTIRKV FKSKPVTEGA GVQLKRAFGF SESPLFDPFL LLDDFRSDNP DDYLAGFPRH PHRGIETITY LLEGHVEHRD SLGNSGRINA GDVQWMTAGS GIIHEEMPVG SSRGGIAGFQ VWANLPASQK MTPPRYRDIS AEMIPEVHLD NQISLRVIAG EIEGIKGPAD DIAIDPVFLD IIIPPETAAD FPVNPAHSAA AYIIGGSATF SHDMQDMNAS ASPGNETVLL FNTDGDHLHI VTHEESVRFL FLSAKPLNEP VAWHGPIVMN TNHELQKAFE DYENGTFIKE
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