Gene Paes_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1676 
Symbol 
ID6459743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1825596 
End bp1826468 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content52% 
IMG OID642725664 
ProductPirin domain protein 
Protein accessionYP_002016341 
Protein GI194334481 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.105924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAC CAAGAACAAT CCGCAAAGTG TTCAAAAGCA AACCGGTAAC CGAAGGCGCA 
GGAGTACAGC TGAAACGTGC ATTCGGGTTC AGTGAATCCC CACTTTTCGA TCCCTTTCTC
CTCCTTGACG ACTTCAGATC AGACAATCCG GACGACTATC TTGCAGGGTT TCCCCGCCAT
CCACACAGAG GCATCGAAAC CATAACCTAC CTGCTGGAAG GCCACGTCGA ACATCGCGAC
AGCCTGGGCA ACAGCGGCAG GATCAATGCA GGAGATGTTC AGTGGATGAC TGCCGGAAGC
GGGATCATCC ATGAAGAAAT GCCCGTCGGC AGCAGCAGAG GCGGCATCGC CGGCTTTCAA
GTATGGGCAA ACCTGCCAGC ATCTCAGAAA ATGACACCCC CACGCTACCG TGATATCAGC
GCAGAGATGA TTCCGGAAGT TCATCTTGAC AACCAGATCT CGCTCAGGGT TATTGCCGGA
GAGATTGAAG GCATTAAAGG TCCGGCAGAT GACATTGCCA TCGATCCGGT CTTTCTCGAT
ATCATCATTC CTCCCGAAAC GGCAGCAGAT TTCCCGGTCA ATCCAGCCCA CTCAGCAGCA
GCGTATATCA TAGGCGGCAG TGCCACATTC AGTCACGACA TGCAAGACAT GAATGCCTCA
GCAAGTCCAG GCAATGAAAC CGTACTGCTC TTCAACACCG ACGGCGACCA CCTGCATATC
GTTACCCACG AGGAATCCGT CAGGTTTCTC TTCTTATCAG CAAAACCGCT CAACGAACCT
GTAGCCTGGC ACGGCCCCAT TGTCATGAAC ACAAACCACG AACTCCAGAA AGCCTTTGAA
GACTATGAGA ACGGAACGTT TATCAAGGAA TAA
 
Protein sequence
MHQPRTIRKV FKSKPVTEGA GVQLKRAFGF SESPLFDPFL LLDDFRSDNP DDYLAGFPRH 
PHRGIETITY LLEGHVEHRD SLGNSGRINA GDVQWMTAGS GIIHEEMPVG SSRGGIAGFQ
VWANLPASQK MTPPRYRDIS AEMIPEVHLD NQISLRVIAG EIEGIKGPAD DIAIDPVFLD
IIIPPETAAD FPVNPAHSAA AYIIGGSATF SHDMQDMNAS ASPGNETVLL FNTDGDHLHI
VTHEESVRFL FLSAKPLNEP VAWHGPIVMN TNHELQKAFE DYENGTFIKE