| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1672 |
|---|
| Symbol | |
|---|
| ID | 6459627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1820166 |
|---|
| End bp | 1821077 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642725660 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002016337 |
|---|
| Protein GI | 194334477 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000269859 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.37402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAAAA ATAAGATACA CGCAAAGAAG ATCGTCACGA CCATTCTGCA GCTGGCCATT
TCCGTTCTGG CACTCTACAT TGTCCTGACA AAAACCGATA CAGCGAAACT GATTGAGGTT
ATCAGAGAGG CTAATCCATG GTACCTCCTT CTTGCCGTCA TCGTCTTCAA TATCTCGAAA
ATTCTCAACG CACTGAGGCT CAACCGCTTT TTCAGGGCCA TCGGGCTTGA ACTTTCAACA
GCCTACAACA TCCAGCTCTA CTACGTAGGC ATGTTCTACA ACATGTTTCT TCCCGGTGGA
ATCGGCGGCG ACGGATACAA AATCTACATT CTCAAAAAAA ATCACAGCAT GAAAATGGTC
AATGTTTTCA ATGCTGTGTT CTGGGACCGT GTGGCAGGCA TTTTCGCACT GCTCTTTCTG
ACCCTCATGC TCATGCTGCC AAGCTCGTTC GCATCCCTCA ACCCGCAATA CGTCCCGCTG
GCATGGGTTG TCCTTGTCAT AACCTATCCG GTTTCATGGG GCCTTACAAG AATCCTCTAC
AAACAGTTCA AGGAAATTTT CGCGATCACG GCCGTTGAAT CCATTCTCAT TCAGGCTGCC
CAGGCCGTGG CAGCGTACTT CATACTTCTC GCCCTGTCGC TTCCTGCGCA TCATATCGAC
TACCTGGCAA TCTTTCTTGT TTCAACCGTC GCAACCGTCC TGCCAATCAC CGTCGGCGGA
GCAGGAGCAA GAGAAATCAC CTTTTTCTAC TCACTCAACT ACCTGCAGCT CGAACCCAAC
ACCGGTGTAG CCCTTTCGCT GATCTTTTTC GCCATATCAG CTCTATCGGC GCTCTCCGGC
ATGCTCTTCC AGAATCGCTC CACTGGCTCG GACAGAGGAG AAAAAAACGC ACAGGTCACG
AAGAAGGAGT GA
|
|---|
| Protein sequence | MSKNKIHAKK IVTTILQLAI SVLALYIVLT KTDTAKLIEV IREANPWYLL LAVIVFNISK
ILNALRLNRF FRAIGLELST AYNIQLYYVG MFYNMFLPGG IGGDGYKIYI LKKNHSMKMV
NVFNAVFWDR VAGIFALLFL TLMLMLPSSF ASLNPQYVPL AWVVLVITYP VSWGLTRILY
KQFKEIFAIT AVESILIQAA QAVAAYFILL ALSLPAHHID YLAIFLVSTV ATVLPITVGG
AGAREITFFY SLNYLQLEPN TGVALSLIFF AISALSALSG MLFQNRSTGS DRGEKNAQVT
KKE
|
|---|
| |