Gene Paes_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1662 
Symbol 
ID6458663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1808053 
End bp1809114 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID642725650 
Producttranslation initiation factor, aIF-2BI family 
Protein accessionYP_002016327 
Protein GI194334467 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.371089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG CAATATCGTT TACCAACGGA ACCCTTCGCT ATCTGGACCA GCGATTCCTT 
CCCCTTCAGG AAAACTACGT GGAGACAAGG AGCCATATGG AAGCCATCGA AGCGATAAAA
ACACTGGCTG TCCGTGGTGC ACCACTGATC GGCGTAGCAG CAGGATACAC CGTCATTCTC
GGCCTGCAGA GCTACGAAGG GACAAAAGAG GAGTTCCCCG CCTATTTCGA CAGGCTGATC
GCCGATGTCG AAGCATCGAG GCCTACTGCC GTGAATCTCT TCTTTGCCAC CGCGAAGCTC
AAAGATCTCT TCAAGGCACA CTATGCCGCC CTTTCGCTCG AGGCTCTCTT CGCTGCAATG
AACGCAGCGG CGGTTGAGAT TCACAACGAT GAAATCGCCA ACTGCGACAA CATGTCCCGC
CATGGCGTCG AGCTGATAAA ACAGGATCTG GCCGAAACCC TGAAAACGCG CAAACTGACC
GTTCTGACTC ACTGCAATAC CGGCACGCTG GCAACCGGCG GCTCAGGAAC AGCACTCGGC
GTCATCAAAC TCGCATGGCA GGAAGGACTG ATTGAAAAGG TCATCACCGC CGAAAGCCGC
CCCCTGTTGC AGGGCCTTCG CCTGACGGCA TGGGAACTTG AACAGGAAAA AATCCCGTTC
TACTCCATTT CCGACTCATC GTCGGCATTT CTGATGCAGA AAGGCATGAT CGATTTCGGC
ATCGTCGGTG CAGACAGAAT TGCATCAAAC GGCGATACCG CCAATAAAAT CGGCACCTGT
GCACATGCCA TCAGCGCCTA TCACCACAAG ATTCCGTTCT ACATCGCAGC TCCTGTTTCC
ACCATCGATA TCACGATCGA CAACGGCACA CAGATCCCGA TCGAAGAACG CAATGGCGAT
GAATTGCGCA CCATTTTTGG AACCCAGGTT GCCACACCAA CAACCCCGGT CATCAACTAT
GCCTTCGACG TCACCCCGAA CCAGTTCATC AACGGGATCG TCACCGACAA AAAAGCCGTT
ACGGGCAACT ACAGCCAAGA GCTGCAGAAG CTCTTCACGT AA
 
Protein sequence
MIDAISFTNG TLRYLDQRFL PLQENYVETR SHMEAIEAIK TLAVRGAPLI GVAAGYTVIL 
GLQSYEGTKE EFPAYFDRLI ADVEASRPTA VNLFFATAKL KDLFKAHYAA LSLEALFAAM
NAAAVEIHND EIANCDNMSR HGVELIKQDL AETLKTRKLT VLTHCNTGTL ATGGSGTALG
VIKLAWQEGL IEKVITAESR PLLQGLRLTA WELEQEKIPF YSISDSSSAF LMQKGMIDFG
IVGADRIASN GDTANKIGTC AHAISAYHHK IPFYIAAPVS TIDITIDNGT QIPIEERNGD
ELRTIFGTQV ATPTTPVINY AFDVTPNQFI NGIVTDKKAV TGNYSQELQK LFT