Gene Paes_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1656 
Symbol 
ID6458659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1802899 
End bp1803708 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content52% 
IMG OID642725644 
Producthydrolase, TatD family 
Protein accessionYP_002016321 
Protein GI194334461 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCG ATGTTCACTC TCACCTTTCG TTTCCGGAAT TCGACCAGGA CCGCCCTGAA 
ATCATCCAGC GCATGCTGGA GCACAATGTC GGTTATCTGA TCGATCCGGG AATTAATGAA
ACAACCAGCC GCAGGGCAAT AGCCCTGGCA AAAGAACATC CATTCATCCG AGCCTGTGTA
GGGCTCCATC CCCATGAAGT CAGAGGGCCC CTGAGCAACC CGATAATCGA TGGACTCTCC
TCCCTGCTTA TCGATGAAGT GGTTGTCGGT GTCGGGGAAA TCGGTCTCGA CTACCATTAT
CCTGATTATG ATGCCGCTGC CCAGCAAGAA GCATTCAGAA CGATGCTTCG CCTTGCCCGG
CACCATAATC TTCCTGTCGT CATCCATTCA CGCGATGCGT GGAAAGACAC GCTCCGCATT
CTACGCCAAG AGCGCCACTC TGACCTTCGG GGCATCATGC ACTGTTTTTC CGGAGATGCA
GCAATCGCAG CCGAGTGCAT CGAACTGGGC TTAAGCATTT CAATACCGGG AACCATAACC
TATAAAAAAT CCATACTTCC CGAGGTCGTC AGGGCCATCG ATCTGCGCCA CATACTCACA
GAAACCGACG CCCCATACCT CTCGCCGGTC CCTTTTCGCG GAAAACGCAA TGAACCATCA
TTCGTCCGCT ACGTCACTGC AGCGATTGCC GAGTGTAAAC AAATACCTCT CGAAGAAGCT
GAAAAACATA TCGAAGCCAA TACATTCAGA CTTTTCAGCC CTGGGGGAAG TCCCCAAAAA
AGCGATGAAA AAGCCGAATC CGCTGTTTGA
 
Protein sequence
MLVDVHSHLS FPEFDQDRPE IIQRMLEHNV GYLIDPGINE TTSRRAIALA KEHPFIRACV 
GLHPHEVRGP LSNPIIDGLS SLLIDEVVVG VGEIGLDYHY PDYDAAAQQE AFRTMLRLAR
HHNLPVVIHS RDAWKDTLRI LRQERHSDLR GIMHCFSGDA AIAAECIELG LSISIPGTIT
YKKSILPEVV RAIDLRHILT ETDAPYLSPV PFRGKRNEPS FVRYVTAAIA ECKQIPLEEA
EKHIEANTFR LFSPGGSPQK SDEKAESAV