Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1654 |
Symbol | |
ID | 6458438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1801415 |
End bp | 1802287 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725642 |
Product | Shikimate dehydrogenase substrate binding domain protein |
Protein accession | YP_002016319 |
Protein GI | 194334459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.910773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAGTA TTACATCAAT ACTCGGACTG ATCGGGAGAA ATGTCAACTA CTCATACTCC CCTTTTATCC ACAACACCGC AGCAGAAATG CTGCGGCTCC CGTTTTATTA TACAATTTTC AACATAGCCG ATGCCCGGCA GATTCCTGAC GCACTTAACG GAATGAGAGC CCTTGGTATA GCGGGTTTGA ACGTCACCAT TCCCTACAAA CAGGTGGTCA CTGAATATGT AGATACCCTT TCCGCAGAAG CTCAAGCTGT CGGGGCTGTC AATACCATCG TCAACAACAA CGGCAGACTG AGCGGCTGCA ATACCGATAT TGCCGGAGTA TCACATCCGC TCAAACCCTA TAAAGAGCGT CTCCATCAAT CGCCTGCAGG CATTTTCGGC AACGGAGGGG CTGCCCTGGC AGCGGTTGAA GCGCTGCGCC GCGACTACCA TCCCTCAGCC ATTCGCCTCT TTGTCAGGGA TCCTGACAAA GGGCTGGCTC TCGCAGAGCA GGTTCATGCG AAGCACCCGG AAGCTCCCAT TGAAATATTC AAGATCGATG CTTATGATGC TATCCGCGAC TGCCACCTTC TGATCAATGC AACCCCGATC GGGACCAAAG GTGTTCAAAC TGCAGGAAAC AGCGCTCTTC TGCCCCAGGA ACAAAAGCTC CTGCACGACG GGCAGATTAT TTTCGACATG GTCTATAATC CTCTTCGAAC CCCGTTTGTC AACATGGCCG CAGAAGCAGG CGCAGTCGTC ATCCCGGGGG TCGAGATGCT TATAGCTCAG GCTGCAGAAT CTTTTTGCCT GTGGACCGGC GAAACAATGC CTGTCGATAG TATCCGCGAA AAAATTCTCA AAAAACTGAC AGCACAGCCC TGA
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Protein sequence | MCSITSILGL IGRNVNYSYS PFIHNTAAEM LRLPFYYTIF NIADARQIPD ALNGMRALGI AGLNVTIPYK QVVTEYVDTL SAEAQAVGAV NTIVNNNGRL SGCNTDIAGV SHPLKPYKER LHQSPAGIFG NGGAALAAVE ALRRDYHPSA IRLFVRDPDK GLALAEQVHA KHPEAPIEIF KIDAYDAIRD CHLLINATPI GTKGVQTAGN SALLPQEQKL LHDGQIIFDM VYNPLRTPFV NMAAEAGAVV IPGVEMLIAQ AAESFCLWTG ETMPVDSIRE KILKKLTAQP
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