Gene Paes_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1645 
Symbol 
ID6459318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1790910 
End bp1791251 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID642725633 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002016310 
Protein GI194334450 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.428632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA TGTCTATCGC TCTTTCCGTC GTTGATGCTA TAACGGCAAG GGCAAGGGAG 
GAACAGGCTG AAAAAGTGAC CGCTATCGAG CTGGTGGCAG GAAAGCTTTC AGGGGTAGAG
ATTGAGTCTC TGAAGTTCTG TTTCTCTGCA GCTGTTCGCG GTACAATCAT GGAGGATGCT
GAGCTTATGG TGACGGTTCC TCTTTCGGAA GGTCTTTGTG AGGTGTGCGG GGAACGGTTT
GCTGTCGACG GCTATTATAC GCAATGTCCT TCCTGTGGTT CTTACAAGGT GAGGATTGTT
TCAGGAAAAG AGTTGTCAAT ACGCTCGATA ACGCTGGAGT AG
 
Protein sequence
MHEMSIALSV VDAITARARE EQAEKVTAIE LVAGKLSGVE IESLKFCFSA AVRGTIMEDA 
ELMVTVPLSE GLCEVCGERF AVDGYYTQCP SCGSYKVRIV SGKELSIRSI TLE