Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1639 |
Symbol | |
ID | 6458406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1782583 |
End bp | 1784613 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642725627 |
Product | histidine kinase |
Protein accession | YP_002016304 |
Protein GI | 194334444 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.576569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCTT CACAAAGAGA AGAAAACAGC TTACCCCTTT TGCGTTATGA TATGCTTGAG TTCCGACCGG AATGGCAGTT TGACGATCCG GATTCGGGAG CGTATTACCA TAGCGGAGTG GTTGTCAATA AGCTGTTTTT CACATCCCTC GGAGGAGATA TACAGTATGA GGTGGCAGAG AAGGCGCTTG CGTTTGTAAG AAAGCTCTTT TCCGACGGGG TCCTCAGGGA TTGCGAGTAT ATCAGAATCG CTGATTATTC AGGTGTGAGC AAGGCGACCA TCAACAGCAG AATTCTCTAT GCAAATACAC TCAACAAGCT TACCGAAGAG TATAACTGCC GTCCGTCTGT AACCTATATC TGCGGCGCTT CAGTGCTCCT GAAGACTATG CTTCGGATTT TTTCCCATAT TGTCAGCCAG CGTTTCTTTT TTGTGGATTC TGTCGATGAA GCGTTTCGTC GTATCAACGC TCATGAGATG TCAGGATGTG TCGTTTCTTC GGAAAGCCTT GTGGTCACAA GAAAAGAGAT TGATGAATTT GCCGCCCTTT GCGGCCATCT TTTATTTGAG GACACCAATG TCAAGAGCTT TTCACGAGAC TATATATCGG AGGATCATCC GCTTAACGAG CTCTACAAAA TTATCGGGGT TCTGCACAAT GATCTCGGCG AGCTGAAGCA GAAAGAAAAG GATCAGAAGA AACGGCTTGA GGAGGCACTG TTCGAAGCAC GTTCTCTTAA CCAGAAGCTT ATTGATGAAA AGCGTAATGT CGAGGAAAAC GAGAGGGTTC AGCAGGAGCT GATCGATACC CTCAAAAAAG CGCGTGTCGA GGCTGAGAGC GCCAACAAGG CTAAAAGTGA ATTTCTGGCC AATATCTCTC ATGAGATCAG GACGCCGCTG CATGCGGTGA TTGGGATGAC AGAGCTTCTT CTTGAATCAT CGCTTGCAAA AGATCAGCAG TATTATGCCG ATACCATCTC TTCGAGTGCC CACCTGCTTC TGCTTCTGAT CAACGATCTG CTTGATTTCA GTCGCATTGA AGCCGGATAT ATCGACCAGG AGAAAGAGGA TTTTGATATG CGGCGCCTTA TTGGCGATAT CATGTCGCTC ATGAAGGATA GTGCCAGCAG AAAAAGGTTG TTGCTCGACA GCAGGGTGGA TGAACGCCTG TCGTTTTGTT TGACCGGGTA TCCCGGGTAT CTGCGACAGG TGCTCATGAA CCTGATACAG AATGCTGTCA AGTTTACCTA TAAGGGGATG GTCTCTCTTC ACGTAACGCT GCTTTCAGAG ACACCGGAAC ACGTTTCGCT TGAATTTTCT GTCAAGGATA CCGGTGTCGG TATTGCCGAA GAACAGTTAA AGGTTATTTT TCATCGATTT ACGCAGATTG ACGCCTCTTC AACAAGAAAA GAAGGGGGGA CAGGTCTTGG CCTGGCTATC GTCAAACAGC TTGTTACCTT CATGGGTGGA GAGGTTTCGG TCGATAGTCG TCAGGGAGAG GGATCTGATT TTCGTTTCTC TCTTACATTT GACAAGGCCG GTGAGGCAAA AGCGGATCAG TCTTCTGCAG ACCTTTCATG CAGGCAAAAA GACGGATTCC GATCATCACG TTCTGTTGAC GATATTATCC GTCCTCATCG GATTCTGCTG GTTGAAGACA ACGTTATCAA CCAGAAAGTT GCCCAGGCGA TGATTGAAAA AATCGGCTAC GAGATCGACA TTGCCGTCAA CGGGGAGGAA GCTGTCGAAG CTCTTCAGCA GAAGCAATAC GGACTTGTTC TTATGGATCT GCAGATGCCG GTCATGGACG GTTTTGAAGC GACACGACGC ATCAGGAAAT TCGGAGGACT TGCGTCTAAC GCGAGGGTTC CGGTTGTTGC TATGACGGCA AATGCCACAA GAGAAGACAG GGAGTTATGC CTTCGGGCGG GAATGGACGA TTACCTGTCC AAGCCTGTTG AACGGCAGGT GCTTCTCGAT ATGCTTCAGC GATGGCTCCC CTTCAAGGAT GAGCCGGGCG TTGAGACCTG A
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Protein sequence | MDPSQREENS LPLLRYDMLE FRPEWQFDDP DSGAYYHSGV VVNKLFFTSL GGDIQYEVAE KALAFVRKLF SDGVLRDCEY IRIADYSGVS KATINSRILY ANTLNKLTEE YNCRPSVTYI CGASVLLKTM LRIFSHIVSQ RFFFVDSVDE AFRRINAHEM SGCVVSSESL VVTRKEIDEF AALCGHLLFE DTNVKSFSRD YISEDHPLNE LYKIIGVLHN DLGELKQKEK DQKKRLEEAL FEARSLNQKL IDEKRNVEEN ERVQQELIDT LKKARVEAES ANKAKSEFLA NISHEIRTPL HAVIGMTELL LESSLAKDQQ YYADTISSSA HLLLLLINDL LDFSRIEAGY IDQEKEDFDM RRLIGDIMSL MKDSASRKRL LLDSRVDERL SFCLTGYPGY LRQVLMNLIQ NAVKFTYKGM VSLHVTLLSE TPEHVSLEFS VKDTGVGIAE EQLKVIFHRF TQIDASSTRK EGGTGLGLAI VKQLVTFMGG EVSVDSRQGE GSDFRFSLTF DKAGEAKADQ SSADLSCRQK DGFRSSRSVD DIIRPHRILL VEDNVINQKV AQAMIEKIGY EIDIAVNGEE AVEALQQKQY GLVLMDLQMP VMDGFEATRR IRKFGGLASN ARVPVVAMTA NATREDRELC LRAGMDDYLS KPVERQVLLD MLQRWLPFKD EPGVET
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