Gene Paes_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1627 
SymbolnifH 
ID6459222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1771033 
End bp1771857 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID642725615 
Productnitrogenase reductase 
Protein accessionYP_002016292 
Protein GI194334432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000481616 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGA TTGCGATTTA TGGTAAAGGC GGTATCGGCA AATCCACCAC AACACAGAAT 
ACTGTTGCAG GTCTGGCCGA AATGGGAAAC AAAGTCATGG TTGTCGGTTG CGACCCGAAA
GCTGACTCGA CAAGGCTCCT GCTTGGTGGC CTGACTCAGA AAACTGTCCT CGATACCTTG
CGCGAGGAAG GAGAAGATGT TGAACTCGAA GATATCATCA AAGAGGGATA CGGTGCTTCG
CGCTGCACCG AGTCTGGTGG TCCTGAGCCT GGCGTAGGTT GTGCCGGCAG AGGTATCATC
ACATCGGTAA ACCTGCTTGA GCAGCTTGGT GCCTACGATG ACGAGTGGGG CCTTGATTAT
GTCTTCTACG ATGTGCTTGG TGACGTTGTG TGCGGTGGCT TCGCAATGCC CATTCGCGAC
GGGAAGGCTC AGGAGATCTA CATCGTCGTA TCAGGTGAAA TGATGGCCAT GTATGCTGCC
AACAACATCT GTAAAGGTAT CCTCAAATAC GCAGATGCTG GTGGTGTTCG TCTCGGTGGT
CTTATCTGCA ACAGCCGTAA GGTTGACAAC GAAAGAGAGA TGATCGAAGA ACTTGCCCGT
CAGCTCGGCA CCCAGATGAT TCACTTCGTG CCTCGCGACA ACATGGTCCA GCGCGCAGAA
ATCAACCGTA AAACCGTGAT CGACTTCGAT CCGTCACACA ACCAGGCCGA CGAGTACAGA
GCGCTTGCAA CGAAAATCGA CCAGAACGAA ATGTTCGTCA TCCCGAAGCC GCTTGAAATC
GAAGAGCTCG AAAAACTCTT GATTGATTTT GGTATCGCTA ACTAA
 
Protein sequence
MRKIAIYGKG GIGKSTTTQN TVAGLAEMGN KVMVVGCDPK ADSTRLLLGG LTQKTVLDTL 
REEGEDVELE DIIKEGYGAS RCTESGGPEP GVGCAGRGII TSVNLLEQLG AYDDEWGLDY
VFYDVLGDVV CGGFAMPIRD GKAQEIYIVV SGEMMAMYAA NNICKGILKY ADAGGVRLGG
LICNSRKVDN EREMIEELAR QLGTQMIHFV PRDNMVQRAE INRKTVIDFD PSHNQADEYR
ALATKIDQNE MFVIPKPLEI EELEKLLIDF GIAN