Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1627 |
Symbol | nifH |
ID | 6459222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1771033 |
End bp | 1771857 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725615 |
Product | nitrogenase reductase |
Protein accession | YP_002016292 |
Protein GI | 194334432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000481616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA TTGCGATTTA TGGTAAAGGC GGTATCGGCA AATCCACCAC AACACAGAAT ACTGTTGCAG GTCTGGCCGA AATGGGAAAC AAAGTCATGG TTGTCGGTTG CGACCCGAAA GCTGACTCGA CAAGGCTCCT GCTTGGTGGC CTGACTCAGA AAACTGTCCT CGATACCTTG CGCGAGGAAG GAGAAGATGT TGAACTCGAA GATATCATCA AAGAGGGATA CGGTGCTTCG CGCTGCACCG AGTCTGGTGG TCCTGAGCCT GGCGTAGGTT GTGCCGGCAG AGGTATCATC ACATCGGTAA ACCTGCTTGA GCAGCTTGGT GCCTACGATG ACGAGTGGGG CCTTGATTAT GTCTTCTACG ATGTGCTTGG TGACGTTGTG TGCGGTGGCT TCGCAATGCC CATTCGCGAC GGGAAGGCTC AGGAGATCTA CATCGTCGTA TCAGGTGAAA TGATGGCCAT GTATGCTGCC AACAACATCT GTAAAGGTAT CCTCAAATAC GCAGATGCTG GTGGTGTTCG TCTCGGTGGT CTTATCTGCA ACAGCCGTAA GGTTGACAAC GAAAGAGAGA TGATCGAAGA ACTTGCCCGT CAGCTCGGCA CCCAGATGAT TCACTTCGTG CCTCGCGACA ACATGGTCCA GCGCGCAGAA ATCAACCGTA AAACCGTGAT CGACTTCGAT CCGTCACACA ACCAGGCCGA CGAGTACAGA GCGCTTGCAA CGAAAATCGA CCAGAACGAA ATGTTCGTCA TCCCGAAGCC GCTTGAAATC GAAGAGCTCG AAAAACTCTT GATTGATTTT GGTATCGCTA ACTAA
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Protein sequence | MRKIAIYGKG GIGKSTTTQN TVAGLAEMGN KVMVVGCDPK ADSTRLLLGG LTQKTVLDTL REEGEDVELE DIIKEGYGAS RCTESGGPEP GVGCAGRGII TSVNLLEQLG AYDDEWGLDY VFYDVLGDVV CGGFAMPIRD GKAQEIYIVV SGEMMAMYAA NNICKGILKY ADAGGVRLGG LICNSRKVDN EREMIEELAR QLGTQMIHFV PRDNMVQRAE INRKTVIDFD PSHNQADEYR ALATKIDQNE MFVIPKPLEI EELEKLLIDF GIAN
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