Gene Paes_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1623 
Symbol 
ID6459311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1766443 
End bp1766979 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID642725611 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_002016288 
Protein GI194334428 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.381924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG AAACCATCAT GCCGCTTTAT TCAGCCCGTG CAATCCGGAA ACGGGTTGCC 
GAACTTGGTT TGACTATTAC TGAAAACTAC CGCGAAACAC AACAACTGAC TGTGTTATGC
GTGCTGAAAG GAGCGTTCAT CTTTACCGCT GATCTGGTGC GAAACATCAA GGTGCCCTGC
ACAATAGAAT TTCTTCGTGC ATCGAGTTAC GGCAACATGA CAAGTTCTTC GGGAGAGGTA
TTCATCCAGC ACGATCTCGA CATAAGCAAC AAGGATGTCC TTGTGATAGA AGATATCGTC
GATTCAGGCC TGACCCTTCA ACGCATCATC GGGGAACTCG ACTCGCTCGG CCCATCATCA
CTGAAAGTAT GTGCACTACT CGACAAACCT GCCGCAAGAA GATATCCAGT CACGATACAT
TACCGTGGAT TCAGCATCCA GAATGTATTT GTTGTCGGAT ATGGCTTGGA TGCAGGAGGA
AAATACAGGG AACTCCCTTT CATAGGAATG CTGGAACAAA TCACTTGCAG CTCATAA
 
Protein sequence
MKAETIMPLY SARAIRKRVA ELGLTITENY RETQQLTVLC VLKGAFIFTA DLVRNIKVPC 
TIEFLRASSY GNMTSSSGEV FIQHDLDISN KDVLVIEDIV DSGLTLQRII GELDSLGPSS
LKVCALLDKP AARRYPVTIH YRGFSIQNVF VVGYGLDAGG KYRELPFIGM LEQITCSS