Gene Paes_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1618 
Symbol 
ID6459637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1759659 
End bp1760714 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID642725606 
Producthypothetical protein 
Protein accessionYP_002016283 
Protein GI194334423 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain
[TIGR00341] conserved hypothetical protein TIGR00341 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGG CCATTTGTGA ACAGCTGTTC AACTGTCGAG CCATTCAGCT ATCCGGCCAG 
AAAGCATTTA AAATTATGAA ACTTATCGAA GTTATTGCTG CTGCCAGCAG CGTCAAAACG
GTGACGGCTA TCGCAGAGAA GCTCAAGGCC CGTGATTTTC GTCTTGGCCT GAAAGATGCT
GATGATACGC AATTGATGCG CCTTGTTGTG CCAAACGATA AGGTGCAGGA AACGCTTGAT
GCTCTCCAGA GTGTTCTCGG GGCGCAGAGC TATTCGAAAC TTCTCGTCTA TCCGATTGAT
ATTTCGCTTC CAAAAATGAC GGATGCGCAG GAGGACAAAG AGGCCAAAGC GCTGCAGGCC
CGTGAATCAC TCTACAAGGA GGTTCAGAAA AATGCCCGCC TTGACGTCAA TTATCTTGTG
CTGGTCATGT TATCGACTAT TGTTGCTGCT ATTGGACTGA TTGAAGACAA TGTGGCCGTG
GTGATCGGGG CGATGGTGAT CGCGCCTTTG CTCGGGCCAA ATCTTGCGTT CGGTCTTGGA
ACGGCTCTCG GGGACCTTTC CATGATGAAG AACGCTCTGA AGACCCTGGC CGCGGGAGTT
GCTCTTGCTC TTATGCTTTC TGTCGTGATC GGTGTCGTAT GGCCGTTTCC GCTTACCAGT
CCGGAATTGC TCACCCGTAC CGATGCGGGT CTTGATTCTA TTGCTCTGGC TTTTGCTTCG
GGAGCGGCGG CGGCGCTTTC CCTCAGTACC GGCCTTCCAG CCGTTCTTGT CGGGGTGATG
GTTGCCGTCG CTCTGCTGCC TCCGGCGGCG ACTTGCGGTC TTATGGTCGG CCATGCGCGT
TTCGATCTCG CGGCAGGAGC CGCGCTGCTG CTGGCAGTCA ACGTGGTCTG TGTGAATCTT
TCATGCAAGC TTGTCTTTCT CATTAAGGGA ATCCAGCCAA GAACATGGTG GGAGAAGGAG
ACTGCAAAAA AGGCTATGCG CTCGTATATT ATCATATGGG TTGTTACCCT GTTGCTTCTG
GCGCTCGTTA TTTCAGCAAG AACGATTTCC ATATAG
 
Protein sequence
MSRAICEQLF NCRAIQLSGQ KAFKIMKLIE VIAAASSVKT VTAIAEKLKA RDFRLGLKDA 
DDTQLMRLVV PNDKVQETLD ALQSVLGAQS YSKLLVYPID ISLPKMTDAQ EDKEAKALQA
RESLYKEVQK NARLDVNYLV LVMLSTIVAA IGLIEDNVAV VIGAMVIAPL LGPNLAFGLG
TALGDLSMMK NALKTLAAGV ALALMLSVVI GVVWPFPLTS PELLTRTDAG LDSIALAFAS
GAAAALSLST GLPAVLVGVM VAVALLPPAA TCGLMVGHAR FDLAAGAALL LAVNVVCVNL
SCKLVFLIKG IQPRTWWEKE TAKKAMRSYI IIWVVTLLLL ALVISARTIS I