Gene Paes_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1612 
Symbol 
ID6459761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1755728 
End bp1756483 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content53% 
IMG OID642725600 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_002016277 
Protein GI194334417 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCCA AGCGAATTAT TCCATGCCTC GACGTCCGTG ATGGGCGAGT TGTCAAAGGT 
ATCAACTTTG AAGGTCTGCG TGACGCAGGC TCAATTCTTG AACAGGCACG CTTCTATAAC
GGCGAACTGG CTGACGAACT CGTCTTTCTC GATATCTCTG CCTCTCTGGA ATCGCGTAAA
ACAACCCTTG GAGAGGTCCT GAAAGTTTCT GAAGAGGTTT TCATCCCACT TACCGTCGGG
GGAGGGATCA GTTCGGTTGA GCGCGCGCAT GACGCATTCA TGCATGGCGC AGATAAAGTC
TCGGTCAATA CCGCAGCAAT AGCAACGCCT GAGCTTATAT CCAGAATTGC AGAAAAGTTC
GGTTCCCAGG CTGTGGTCGT TGCCATCGAC GTCAAAAAAG TCGGAAACGA TTACATCGTC
CACACCCATT CAGGCAAAAA GCCAACGCAA TATGAAGCCA TGGAATGGGC GCACAAAGTC
GAAAAACTCG GTGCAGGCGA AATCCTGCTC ACCAGCATGG ACCGCGACGG AACCAAGTCA
GGCTACGATA ATGTTATCCT CAAGGCCATC TCGACATCCG TCAATATACC CGTCATCGCC
TCAGGCGGCG CGGGAAATCT CGAGCACCTC TATCAGGGCT TCGCCGAAGG CCACGCCGAC
GCAGCGCTGG CCGCCTCAAT CTTCCACTTC CGCCAGTACT CCATCCGGGA GGCTAAAACA
TATCTGAGAG AACGCGGAAT TGTGGTGAGA CTGTAA
 
Protein sequence
MLAKRIIPCL DVRDGRVVKG INFEGLRDAG SILEQARFYN GELADELVFL DISASLESRK 
TTLGEVLKVS EEVFIPLTVG GGISSVERAH DAFMHGADKV SVNTAAIATP ELISRIAEKF
GSQAVVVAID VKKVGNDYIV HTHSGKKPTQ YEAMEWAHKV EKLGAGEILL TSMDRDGTKS
GYDNVILKAI STSVNIPVIA SGGAGNLEHL YQGFAEGHAD AALAASIFHF RQYSIREAKT
YLRERGIVVR L