| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1597 |
|---|
| Symbol | |
|---|
| ID | 6459780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1739430 |
|---|
| End bp | 1741181 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642725585 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002016262 |
|---|
| Protein GI | 194334402 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC TTCTCCATCT GAAAAAGTAC CTGTTCCGTT ACCGCAAAAA TCTGGTATAC
GGCATAGCAT GCATCATTTT CACCAATATA TTTGCTGTTC TTGCACCGCG ATATATCGGT
GCTGCTGTAG ACCTTATGGG AGAATCATTT ACCATGGACA TGATTCTTCG CAAGACCGGT
CTCTATGTGC TCTTTGCCGC GCTCAGCGGC ATTTTCCTCT TTCTTGTACG CCAAAATATC
ATCGTTGCAT CCCGTAAGAT AGAATTCGAT CTGAAAAACG ACTATTACGC CCATCTGCAA
ACCCTTTCGC GATCGTTTTA CAATAACACC AGTACCGGCG AACTGATCTC TCGCGGCACC
AATGACCTGA ATGCCGTAAG GGATTTTCTT GGTCCGGGGA TCATGTACTC CATCAATACG
TTTTTCAGGC TCTTTTTTGC CGTAATCGCC ATGCTGCTGA TTTCCCCTCA ATTGACACTG
TTTGCGTTGA TACCAGCCCC GCTCCTGAGC TACTCGGTCT ATCGCATAGG AAAGTCAATG
CAGAAAAAAA CCAGAAGCAT TCAGGAAAGC TACGCAGGCA TCACCAATCT GGTACAGGAG
AATATCTCCG GCATACGGGT CATCAAAAGT TACACGCGCG AAAACGAGGA GATTGAACGA
TTCAGAAAAC TCAACGAAGA GTACTATGAC AAAAACCTCT CCCTGGCAAA GCTGCAAGCA
ATGTTTTTTG CCTTTTTAAC CGCCCTGCTT GCTCTTTCGC TCATACCTGT CATCTGGATG
GGCGGCATCA ATTTCATCGA AGGCACCATG ACCATAGGCG ACATCGCCCA GTTCGTCATT
TATGTCTCCA TGCTCAGCTG GCCGATCATT TCAATCGGAT GGGTCACCAA CATTATCCAG
AAAGCAGCTT CGGCCCAGAC AAGGCTGAAC GAAATCTTCA ATGCCAAACC TGACATAACC
GACAGCACGG CGACAGAGCC GCCAAAAGAG CAAAGCACTT CCCTGTTATC CTTTCGCAAT
GTCTCGTTCT CCTATCCAGG CAATGAGACC CACCAGGTCC TCGACGGCAT TTCATTTGAC
ATAGCAAAAG GCAGCAAAGT AGCTATCGTC GGGGCCACCG GTTCGGGCAA AAGCACACTT
GTCAATCTCA TACCACGAAT CTACGACCCG CTGAAAGGAT CGATTCTCAT CGGTGGACGA
GACATACGAA CCATTGCCCT GTCAGAGCTG AGAAGCCGCA TCGGTTTTGT CCCGCAGACA
AACTTCCTGT TTTCCGAAAC GATTGCCAAT AACATCAATT ACGGCAACAA AAACGAAGAA
ACAGACATGG TGATAGAAGC CAGCCGTATA GCCTCCCTGT ATGAGGATGT CATGGGATTT
CCCGATAAAT TTGAAACCAT GCTCGGTGAA AAGGGCATCA ACCTCTCCGG GGGACAAAAA
CAACGAACCT GCATCGCCAG AGCTCTGGCA TGGAAGCCCG AAATTCTTGT GCTCGATGAC
GCGCTGTCGG CCGTAGACAC CAGTACAGAA GCAACCATTT TCAAGGCTCT TCTGGAAAAA
CTGCCCGATA CGGCGCTGCT TTTGATCAGC CACAGAATTT CAACAGTCAA AAACTGCGAC
ACGATCATTG TTCTCAAAGA CGGCGTCATC GCCGAAAGCG GCAGCCATGA TGAACTCCTG
GCTAAAAACA GTCTCTATGC AGAACTCTAC AACCAGCAGC TGCTTGAAGA CGAGATCAGC
TCCCTGAACT AA
|
|---|
| Protein sequence | MKNLLHLKKY LFRYRKNLVY GIACIIFTNI FAVLAPRYIG AAVDLMGESF TMDMILRKTG
LYVLFAALSG IFLFLVRQNI IVASRKIEFD LKNDYYAHLQ TLSRSFYNNT STGELISRGT
NDLNAVRDFL GPGIMYSINT FFRLFFAVIA MLLISPQLTL FALIPAPLLS YSVYRIGKSM
QKKTRSIQES YAGITNLVQE NISGIRVIKS YTRENEEIER FRKLNEEYYD KNLSLAKLQA
MFFAFLTALL ALSLIPVIWM GGINFIEGTM TIGDIAQFVI YVSMLSWPII SIGWVTNIIQ
KAASAQTRLN EIFNAKPDIT DSTATEPPKE QSTSLLSFRN VSFSYPGNET HQVLDGISFD
IAKGSKVAIV GATGSGKSTL VNLIPRIYDP LKGSILIGGR DIRTIALSEL RSRIGFVPQT
NFLFSETIAN NINYGNKNEE TDMVIEASRI ASLYEDVMGF PDKFETMLGE KGINLSGGQK
QRTCIARALA WKPEILVLDD ALSAVDTSTE ATIFKALLEK LPDTALLLIS HRISTVKNCD
TIIVLKDGVI AESGSHDELL AKNSLYAELY NQQLLEDEIS SLN
|
|---|
| |