Gene Paes_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1593 
Symbol 
ID6460013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1734742 
End bp1735878 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content49% 
IMG OID642725581 
Productsigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_002016258 
Protein GI194334398 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA ATCCGGACAT TCTCGGAAAT TCCCCCGCGA TACAACAGCT CAAACATCTC 
GCCCTGCAGG TAGCTCCGAC AGAAGTCACC GTCCTCATCA CGGGAGAAAC AGGTTCCGGC
AAGGAGGTTC TGGCCCGCTA TCTCCATGAC CACAGCAAAA GGGCCCATAA AAACTTTATT
CCGGTCAACT GCGGGGCCAT CCCGACAGGT ATTCTTGAAT CAGAACTGTT CGGCCACGAA
AAAGGAGCTT TCACCGGAGC GCTGCAAAGC AGAAAAGGAT ATTTTGAAAG CGCTGATCAG
GGGACCATTT TTCTTGACGA AATAGGGGAA ATGCCTCCTG AAACGCAGGT TAAACTGCTC
CGGGTGCTTG AAACAGGAGA GTTCCAGAGG GTAGGCGCTT CAGAGACCAT CTATAGTGAC
GCAAGAATCA TAGCAGCAAC GAACAGGAAA CTGCACCTGG AAGTTGCCGA AAAAAACTTC
CGGGAAGACC TCTACTATCG GCTGCACAGC GTTGAACTGC AGTTACCTCC CCTCAGAGAA
CGCGGACGCG ATATTCTGAT CCTTGCTGAA CAGTTCATCA GAGAGTTCGA GCGGAAACAC
GCTATGGTAT TCGAAGGGTT CACGTCAGAT GCCGCGGAAA TTCTTCTGCG CTACCCCTGG
CCGGGCAACG TCCGTGAACT GAGAAACCTT ATCGAATCGC TGCTTATCCT CGAGCGAGGA
AAACAGATCA CCCCGGAGAT TCTCGAAAAA CATCTCGTAC AGAGAAGCAG AACAAAAAGC
CTGATTCATG ACCCTGAACA ATCAGAAAAA AACCAGATAA ACCTCATATA CAGCAGCATC
ATACAGCTGC ACAAGGAAAT TTCCGATATA AAAAATATCC TGCAGCAAAG CAATGCTGTG
GAGCATGAAC AATACCTCAC GCCCAGGCCC CCGCTGCTGC TGCCTCCGGC ATCGGAAAAT
TCCGAAAACA TCGGTGCACC ACCAGCAAAA ATCCTCTCTC TGGAAACTGT CGAAAAAAAT
GCGATTGAAC ATGCCCTTAA AGCGCTCAAA GGCAACAAAC GCAGGACAGC AAAAGCATTG
GGCATAACCG AAAGAACCCT CTACAGGAAA ATCAAAACCT TCGATCTGGA AATATAA
 
Protein sequence
MNNNPDILGN SPAIQQLKHL ALQVAPTEVT VLITGETGSG KEVLARYLHD HSKRAHKNFI 
PVNCGAIPTG ILESELFGHE KGAFTGALQS RKGYFESADQ GTIFLDEIGE MPPETQVKLL
RVLETGEFQR VGASETIYSD ARIIAATNRK LHLEVAEKNF REDLYYRLHS VELQLPPLRE
RGRDILILAE QFIREFERKH AMVFEGFTSD AAEILLRYPW PGNVRELRNL IESLLILERG
KQITPEILEK HLVQRSRTKS LIHDPEQSEK NQINLIYSSI IQLHKEISDI KNILQQSNAV
EHEQYLTPRP PLLLPPASEN SENIGAPPAK ILSLETVEKN AIEHALKALK GNKRRTAKAL
GITERTLYRK IKTFDLEI