Gene Paes_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1591 
Symbol 
ID6460072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1733168 
End bp1734028 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content54% 
IMG OID642725579 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002016256 
Protein GI194334396 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.076214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGTA TCAGCGTCAA GGCATATGCT AAAATCAATC TTGGCCTCCT GATTACCGGC 
AAACGGCCGG ATGGCTACCA TACTCTCGAG ACCGTGTTTG CCCCGATCAA CTGGTATGAC
GAGCTGACAT TTTCTCCTTC GCAGGAGGTG CGGATGAGCT GTACCAATCA GGATCTTCCC
TGTGACGACA GCAATCTCTG TATCAGGGCT GCAAAGGCGT TGCGTGATTT CTCCGGTGTT
TCATCGGGCG TGGAGATAGG GCTCGCCAAA CACATTCCTT TCGGTGCCGG TCTTGGCGGC
GGTAGCAGTG ATGCTGCCTC GACGCTCAGA GTGCTCAACA GAATGTGGAA TATCAACGCA
TCATCGCATG ATCTGCACCG TATCGCCGTC GGTCTTGGTG CCGATGTTCC CTATTTTCTG
GAGTCCGGCG GACTGGCCTA TGCCGCCGGG ATTGGAGAGG AGCTCGAGGA CCTTGAACTG
ACCCTCCCGT TTTCTATTGT CACGCTTTTT CCCGGCGATC ATATTTCCAC GGTATGGGCG
TACCGCAATT TTTATGCCTG TTTCGAGAGG GAGATTCCGG ATTTGAAAGG ACTGGTGCGG
TCTTTGTGCC AGGCCAGGGA TACTTCCGTT CTGGAGGTGT TCGACAACGA TTTTGAACCG
GTGGTTTTCG ACCATTATCC GGCCGTACGA GAGGCAAAAG ACGCGCTTGT GCAGTCAGGG
AGTTTTTTTG CGTCTCTTTC CGGAAGCGGT TCGGCTGTTT TTGGACTTTT TGAAAACGAC
AGCGATGCAG AGCGAGCTGC AGAGCAGTTG TCGGCAACCT ACCGGGCAAG ATTCACTCCG
GCATCCTTTG CTATGGCCTG A
 
Protein sequence
MQSISVKAYA KINLGLLITG KRPDGYHTLE TVFAPINWYD ELTFSPSQEV RMSCTNQDLP 
CDDSNLCIRA AKALRDFSGV SSGVEIGLAK HIPFGAGLGG GSSDAASTLR VLNRMWNINA
SSHDLHRIAV GLGADVPYFL ESGGLAYAAG IGEELEDLEL TLPFSIVTLF PGDHISTVWA
YRNFYACFER EIPDLKGLVR SLCQARDTSV LEVFDNDFEP VVFDHYPAVR EAKDALVQSG
SFFASLSGSG SAVFGLFEND SDAERAAEQL SATYRARFTP ASFAMA