| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1579 |
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| Symbol | |
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| ID | 6459975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1720040 |
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| End bp | 1721485 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642725567 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_002016244 |
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| Protein GI | 194334384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.268405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATA TGAAACCAGG TTCTTCGATC TACTTTATCG GTATTGGCGG AACAGCCATG
GCCTCCGTCG CTGTCGCCCT TTGTCAGGCG GGCTACATGG TCAGCGGTTC AGACACATCA
CTCTATCCGC CCATGAGCGA CTACCTCTAC GACCATGCCA TCACCTGCCA TGAAGGCTTC
GATGCCGAAC ATCTCGCAGA GACAGAGCCT GACGCCATCG TCGTTGGCAA TGCCGTGAGC
AGAGGAAACC CTGAGCTTGA ATATGCACTC AACCGGCATC TGCCCATGAC CTCGATGCCT
GAAATCGTCC GCACACTGCT CATTGACGCA AACACATCGG TTGTCGTCAC CGGAACTCAC
GGAAAAACAA CGACGACATC GCTCATTGCA TGGCTGTTCG AATACGCCTC GTATCAACCT
GGTTTTCTGA TCGGGGGAAT CGCTGAAAAT TTCGGAGCAG GCTGCAGAGC CTCGGCCGGC
AAAAAAAACA ATGGGTGGTT CATCACGGAA GGAGACGAAT ATGACAGTGC GTTTTTTGAT
AAGCGCAGCA AATTCATGCA CTACCGACCG GATATCGCCA TCATCAACAA CATTGAGTTC
GACCATGCCG ATATCTTCAA CTCCATTGAG GATATCAAAC GCTCATTCAG GCACTTTGTC
AACCTTGTGC CGTCCGAAGG GCTTCTGCTC TGCAATGGGC ACGATGCCGT GGCGCTCGAT
ATAGCCAGCA AAGCGTTCTG CAGGGTTGAG CGCTTCGGCC TTGATAAATC CTGTGACTGG
TCGGCCCGCA ATATAGAGGC CAATGGAGAG AGAACAGCGT TCGAGCTCCT TCACAATCAA
ATTCCCGTTG GCAACCTCGA AATCCCGCTA TTCGGAACAC ACAATATCCT CAACACCCTC
GCTGCGATTG GCTCCGCAAG CCAGGCCGAT ATCCAACTGC CCGTCATCGC CGAAGCCCTC
AGGCACTTCA AAGGGCCGAA ACGCCGGATG GAAGTTATTG GAGATTTTCC CGGCAACATA
ACCCTTATCG ATGATTTTGC TCATCATCCC ACGGCCATCA AAGCAACGCT TGATGCGCTT
CGCCAGAGAT TTCCATCCAG AAGAATCATT GCCTGTTTTG AACCGCGATC CAATACCAGT
ACCCGAAACA CCTTTCAGGA GGAGTTCAGC TCCTGTTTTG ACAGCGCCGA TATTGTCGTT
CTCGGGAAAG TGCACAGGCC CGAACGCTAC CAGGAAAACG AACGTCTCGA CACCCGTCAG
ATCGTCGAAA AGATCGCCGG CAAAGGAAAA GCTGCATTTG CGGCAGGACT GAACATTGAA
CAGTATCCTC TTGATATCGT CCGTTTTCTC GAGCGAACCA TCAATCAGAA CGATGTCATC
ATTCTGCTCA GCAACGGAAG TTTTGACAAT CTCAAAACGC TTTTAGCCGA AAGTTTTAAT
AAATAA
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| Protein sequence | MTNMKPGSSI YFIGIGGTAM ASVAVALCQA GYMVSGSDTS LYPPMSDYLY DHAITCHEGF
DAEHLAETEP DAIVVGNAVS RGNPELEYAL NRHLPMTSMP EIVRTLLIDA NTSVVVTGTH
GKTTTTSLIA WLFEYASYQP GFLIGGIAEN FGAGCRASAG KKNNGWFITE GDEYDSAFFD
KRSKFMHYRP DIAIINNIEF DHADIFNSIE DIKRSFRHFV NLVPSEGLLL CNGHDAVALD
IASKAFCRVE RFGLDKSCDW SARNIEANGE RTAFELLHNQ IPVGNLEIPL FGTHNILNTL
AAIGSASQAD IQLPVIAEAL RHFKGPKRRM EVIGDFPGNI TLIDDFAHHP TAIKATLDAL
RQRFPSRRII ACFEPRSNTS TRNTFQEEFS SCFDSADIVV LGKVHRPERY QENERLDTRQ
IVEKIAGKGK AAFAAGLNIE QYPLDIVRFL ERTINQNDVI ILLSNGSFDN LKTLLAESFN
K
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