Gene Paes_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1574 
Symbol 
ID6459907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1714052 
End bp1715305 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content51% 
IMG OID642725562 
Productsodium/hydrogen exchanger 
Protein accessionYP_002016239 
Protein GI194334379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00810596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGTCT CTCTGTTTGC CGCTCTCATC GGCGGAATTA TAGTTTTAGG TGTAGTTGGC 
GACTTTCTGT TCGCCAAATC CAAAATCCCT ACGCCGGTCA TCCTTATGCT GGCAGGGATT
ATCCTGGGCC CCGTCACCAA TATTTTCACC AGTGATATCT TTTTTGAAAT CGCCCCCTAT
TTCGGGACGT TTGCGCTCAT CCTTATTCTG TTCGAAGGCG GACTGGATCT TGAATTCGAT
CTTGTTATCA GACAGTTCTC TTCAGCCCTG CTGCTGGGGT TTCTGTCCTT TATACTCAGC
TGCGCAGGTA TTACTGCAGT CTGCCTTATC CAGCTGCAGA TGGATATGTC TCAGGCTCTG
CTCTACGGAT TCATTTTTTC GGGAACCAGC CCTGCCGTTA TTCTCCCTAT CCTTTCACGG
CTTTCCATCA CTAAAAACCT TAAAACCCTG CTCACGCTTG AGGCGGTTAT CAGCGAAGTC
CTGACCGTCA TTTCGGTCAT CATCATGATC AATATCCTCC GCGAGCCGGG ACATTTCGAC
CCGCGCCTGA TTGTTCAGCA CATCTCTGCC AGCATTGGTA TTTCAATTGT TCTTGCGCTG
CTGAGCGGAA TTATCTGGAG CAGGTTCATG GGCTATTTCA GTCGCCAGAA CCTCGCCTAC
ATGCTGACGC TCGGCGTTGT TCTGCTCCTC TATACCCTGA CGGCATTTCT TGGCGGAGAA
CCAGCCATCA CGGTCCTCGC GTTCGGCATT CTTCTTGGTA ACGGCAAACA TCTGGCAACC
AAAACCCAGA ATCTGATGGC AAGGATGAAC AGCACCATCA ACGTCACCAA CTTCGAACTG
GACGAGGTAG TCAAAAAAAT CAACGCAGAA CTGACATTTC TCGTCCGGAC ATTCTTCTTT
GTCTTCATCG GCCTGCTTTT CAACTTCACG CTTTTCACGC CAAACGTGCT CTCAACGGCA
GGCACAATAC TTGCAATTTT TCTTATCAGC CGTTACGCCA CCGTCACGAT GGTCAGACCG
CTCTCCCCCT CGCTCAGAAG CGCCCATACC TCTTCGACCC TCGGGCTCAT CCCGAGAGGT
CTTGCGACAG CCGTCATGGC ATTTCTTGTC ATCGATGCAA AGATCACTCC CTCTGATCAG
CTCCTGCCGG TTGTTTTCAG CGTCATACTC GGCAGCAACC TGCTGATGTC CGGATTCGTC
TACTACTATC AGAGCCGCCA CAGCAATCGC GAAGAACAGG AAAAGTCCGC CTGA
 
Protein sequence
MEVSLFAALI GGIIVLGVVG DFLFAKSKIP TPVILMLAGI ILGPVTNIFT SDIFFEIAPY 
FGTFALILIL FEGGLDLEFD LVIRQFSSAL LLGFLSFILS CAGITAVCLI QLQMDMSQAL
LYGFIFSGTS PAVILPILSR LSITKNLKTL LTLEAVISEV LTVISVIIMI NILREPGHFD
PRLIVQHISA SIGISIVLAL LSGIIWSRFM GYFSRQNLAY MLTLGVVLLL YTLTAFLGGE
PAITVLAFGI LLGNGKHLAT KTQNLMARMN STINVTNFEL DEVVKKINAE LTFLVRTFFF
VFIGLLFNFT LFTPNVLSTA GTILAIFLIS RYATVTMVRP LSPSLRSAHT SSTLGLIPRG
LATAVMAFLV IDAKITPSDQ LLPVVFSVIL GSNLLMSGFV YYYQSRHSNR EEQEKSA