| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1572 |
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| Symbol | |
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| ID | 6459689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1711694 |
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| End bp | 1713340 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725560 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002016237 |
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| Protein GI | 194334377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00917582 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGC CATTTATAAC GCTCTACCGC TCACTCCTCC TCAGCCTGAT CTTTATGGTT
CAGGCTCAGG CGCTTTTTGC TACGGTCGAT TCTGTGCAGC AAACCCTCAT GGACTCTCCG
GGAGAAGAGC AGGCTGGCGA TACCAGCGCA ATACAAATGC CCGAACCTGC ACGTGTCAGC
GACAAGGAAG TCGTGAGTGC ATTTTCTGAC TCTCTGGGCG TGCAGCAGGG ATCTCCGGTT
ATTTTTAACA ACCAGGAGCT TTTCAGGCTC TATGATCCGA TCGGTGCTAT CCCGGTAGAA
GAGCGTGCGG AGCAGACCTC GAGACTGCTC GATAAATTTT TCCGTTCAGC CATACCCGTC
GATTCACTTA CCATCGCCGA GGGAGATACG CTTTCAGCAA TCCGGACACC GGAAGAAATC
ATTGCAGCCT TCAGTGATAT TGACGCCGAA AAAGAATCGA TGAGCCGTCA GGAACTTGCC
ATTACCGTTC TGAAGAAAAT CATCCTGCAA ACGACCAGGT TACGTGAAGA ATCCAGCGGA
AAAAGTATCC TGTTCAGCCT TCTGAAGTCT ATCGCACTGT TTCTGGCCCT GACCGTCGTC
TGGCACTATC TGAACAGCTT CTTCACCTTT CTCGATGGAT GGATACAGAA ACTCAGGCTC
CATCACAGAA CCAACAGTGA AAGCAAGCTG ATTCAGTTGC TTTCACCCGA TCACCTCGCT
GCAGGGTTTG GCTGGTTCAG CCGTGTCACG GAACTGTTCC TCAAGATTCT CCTGATATAC
GCCTACCTGG CAACCGTCTT CAGCTTTTTC CCGTGGACCA GCGATCTGTC GACAAACCTT
CTGGAATTCG TGCTCCAACC AGGCAAGAAG CTCATCAGTG AGTTTGTCGC GCTCATTCCT
AATGGAATAG CCGTCCTCAT TCTGATTACC ATCATCCGCT ATCTCGGAAA ATTCAGTGAT
GTCGTCTTTC ACAACATCGA TAAAGGGGAG CTGAAATTCG TCGGCTTCGA GCGGGAGTGG
GCTGAACCGA CCAGAAAAAT CGTCAAAATC ATCCTCTATT TTCTCCTTGC TTTTCTGCTC
TTTGCATCGC TGCCGCTCTT CAAAAACCAG GCATCAATTG TCATCGTCAT CATTTTCGGC
CTGACATTCT CTCTGAGTGC GGTACCAAGT GTCAAGAACG TCATCAGCAG CATCATGCTC
AACTACACCG GTTCGTTCAG ACTTGGAGAC CATGTTCAGA TAGGGGCGAT CAAAGGGGAA
ATCATATACA AAGGCCTTCT GATCACAAGA ATACGCAACG TCTGCAACGA GATCGTCATA
ATACCCAACA GTCAGGTGTT TCATTCAAAA ATCGTAAATT ATACCGAATC TATCCAGAAA
AACGGGCACC TGACAATCGA GGTTGTCTTT CATCTCAAAG AGAACATCAA AACCGAGGTT
CTGAGACAGA AAATCGTCGA AGCAGCCCTC GCAACAGAAG GGATCATGCT TGATCCCAAG
CCTGTTGTCA GCAGGGCGGA AAACCTCAAC GGCAAATACG GCTTCAAGTT ACGGGCAAAC
ACCCAGAAAA TCCAGCAGAT CGAGCACCTG CACACGAAAT TGTCACAAAA CATCCAGGAC
AGACTGCTGG ACAACAATAT CCGATAG
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| Protein sequence | MNKPFITLYR SLLLSLIFMV QAQALFATVD SVQQTLMDSP GEEQAGDTSA IQMPEPARVS
DKEVVSAFSD SLGVQQGSPV IFNNQELFRL YDPIGAIPVE ERAEQTSRLL DKFFRSAIPV
DSLTIAEGDT LSAIRTPEEI IAAFSDIDAE KESMSRQELA ITVLKKIILQ TTRLREESSG
KSILFSLLKS IALFLALTVV WHYLNSFFTF LDGWIQKLRL HHRTNSESKL IQLLSPDHLA
AGFGWFSRVT ELFLKILLIY AYLATVFSFF PWTSDLSTNL LEFVLQPGKK LISEFVALIP
NGIAVLILIT IIRYLGKFSD VVFHNIDKGE LKFVGFEREW AEPTRKIVKI ILYFLLAFLL
FASLPLFKNQ ASIVIVIIFG LTFSLSAVPS VKNVISSIML NYTGSFRLGD HVQIGAIKGE
IIYKGLLITR IRNVCNEIVI IPNSQVFHSK IVNYTESIQK NGHLTIEVVF HLKENIKTEV
LRQKIVEAAL ATEGIMLDPK PVVSRAENLN GKYGFKLRAN TQKIQQIEHL HTKLSQNIQD
RLLDNNIR
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