| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1562 |
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| Symbol | tpiA |
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| ID | 6459292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1701451 |
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| End bp | 1702209 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642725550 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_002016227 |
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| Protein GI | 194334367 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000611161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000778836 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGAAAAA AAATTGTTGT TGGTAACTGG AAAATGAATA AGACCATCGC TGAGGCGGTT
GAGCTTTCGT CTGCTATTAT TGATCAGCTC GGCGAAGTTT CAGCTTCGTG TGAGGTAGGC
ATCGCTCCGG CTTTTCCTGC ATTGAGCGGT GTACATGGTG TTATCAGTGG GACCGGCATC
CATCTTGCGG CTCAGAACTG TCACTATGAG GATGACGGTG CTTTTACCGG AGAGGTTTCT
GTCCGTATGC TTGATGAGGC AGGATGCAGC TATGTGATCG TCGGACATTC CGAACGTCGG
CAGTATTTCG GTGATACTAA TCCGGTCGTC AATCTCAAAG TCAAAAAAGC GCTCTCTGCT
GGCCTGAATG TCATTCTTTG CGTTGGAGAG ACTCTGGATG AGCGTGAAAA GGGGATTACT
ACAGAGGTGG TGACCTGCCA GGTGAAAGAG GGGCTTGAAG GTGTTGCTGA TATCGGGGAT
ATCGTTATTG CCTATGAGCC GGTATGGGCT ATTGGTACCG GGAAAACAGC CAGTAGCCTG
CAGGCGCAGG AGGTGCATGC TTCTATCCGC GCGACCGTCG CCGGCCTCTA CAGCGAGCCT
GCTGCAGCCG GAGTGCGGAT CCAGTATGGC GGAAGCGTCA AACCCTCCAA TGCCGAAGAA
CTTTTTGCCA TGCCTGATAT TGACGGCGGT CTTATCGGCG GAGCCAGTCT CAACGCTGAA
GACTTTGTCG CTATCGTCAA AGCAGCAGAG AAGAGTTGA
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| Protein sequence | MRKKIVVGNW KMNKTIAEAV ELSSAIIDQL GEVSASCEVG IAPAFPALSG VHGVISGTGI
HLAAQNCHYE DDGAFTGEVS VRMLDEAGCS YVIVGHSERR QYFGDTNPVV NLKVKKALSA
GLNVILCVGE TLDEREKGIT TEVVTCQVKE GLEGVADIGD IVIAYEPVWA IGTGKTASSL
QAQEVHASIR ATVAGLYSEP AAAGVRIQYG GSVKPSNAEE LFAMPDIDGG LIGGASLNAE
DFVAIVKAAE KS
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