Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1556 |
Symbol | |
ID | 6458493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1694725 |
End bp | 1695981 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725544 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002016221 |
Protein GI | 194334361 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000449749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000184572 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGATTCA GTTCACTCAA TATTATCGAT CCGATTGCAC GGGCATTACG CGAAGAAGGC TATGCTACGC CGACACCTAT ACAGGCCGAA GCTATTCCCG TTATTCTGGA GGGCAGTGAT CTTCTCGGCT GCGCACAGAC GGGGACAGGA AAAACGGCGG CATTCGCCAT TCCTTTGCTG CAACTGCTCA GTGAGCGCAA CACCTACGAG AAAAAAAGAA AAATCAGAGC TCTTGTCGTG ACGCCGACCA GGGAACTTGC CATTCAGATA GGCGAAAGCT TTAAAGCCTA CGGCCGTCAT ACCGGCCTTA CAAACCGGGT TATTTTCGGC GGGGTTAACC AGAATCCTCA GGCAGCGTCA TTGCGAAACG GTGTCGACAT TGTTGTCGCA ACCCCCGGCC GGCTCCTGGA CCTTATGGGA CAGGGGCATC TGCATCTTCG TGATGTGGAA ATACTTGTTC TGGACGAGGC TGACCGAATG CTCGATATGG GCTTTATTCA CGATATCCGA AAAATTCTCG CAGCTCTTCC GGAAAAGAAA CAGTCACTCT TTTTCTCGGC CACCATGCCG TCTGAAATAG TCAGGTTAGC CGGTACCATT CTGCACAATC CGGCAAAGGT ATCGGTTACG CCGGTTTCGT CGACGGTCGA AACCATACAG CAGCAGGTGT ATTTTGTCGA CAAAGGCAAT AAAAACCGTC TTCTGGTTCA CCTGTTAAAG GATCAGAGCA TAAAAACCGC TCTGGTATTT ACCCGCACCA AACATGGTGC CGACAAAGTG GTGAAGTTTC TCCTGAAACA CGATATCACC GCTGAAGCTA TTCACGGCAA CAAGGGGCAG AACGCACGCC AACGGGCCTT GAACAACTTC AAGAAGCAGT CCACCAGAGT GCTGGTCGCA ACCGATATCG CCGCACGCGG TATTGATGTC GATGCACTGG CATACGTTAT CAACTTCGAT ATGTCGAATA TGGCGGAAAC CTATGTTCAC CGTATCGGCA GAACGGGGCG GGCCGGTGCG GAGGGGACCG CGATCTCTTT TTGCGATGCT GAAGAGAAAG CCTATCTCTG TGACGTCGAA AAACTGATTG CCAAGAAAAT TCCGGTCATC GATCGTCATC CGTTTCCACT GACAGATCTC AATCCGGTCA AGACAGTTGC CCCGCAGGGG CGAGGGGGCT CGGGACGTCC AGGGGCGAAA CCGTCTCACA AAGCCAATTC GAAGCGCTGG TCGGTCAATC CGCGCAAAGC AAGGTAA
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Protein sequence | MGFSSLNIID PIARALREEG YATPTPIQAE AIPVILEGSD LLGCAQTGTG KTAAFAIPLL QLLSERNTYE KKRKIRALVV TPTRELAIQI GESFKAYGRH TGLTNRVIFG GVNQNPQAAS LRNGVDIVVA TPGRLLDLMG QGHLHLRDVE ILVLDEADRM LDMGFIHDIR KILAALPEKK QSLFFSATMP SEIVRLAGTI LHNPAKVSVT PVSSTVETIQ QQVYFVDKGN KNRLLVHLLK DQSIKTALVF TRTKHGADKV VKFLLKHDIT AEAIHGNKGQ NARQRALNNF KKQSTRVLVA TDIAARGIDV DALAYVINFD MSNMAETYVH RIGRTGRAGA EGTAISFCDA EEKAYLCDVE KLIAKKIPVI DRHPFPLTDL NPVKTVAPQG RGGSGRPGAK PSHKANSKRW SVNPRKAR
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