Gene Paes_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1555 
Symbol 
ID6460612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1693705 
End bp1694622 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID642725543 
Productprotein of unknown function DUF89 
Protein accessionYP_002016220 
Protein GI194334360 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000502074 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000247476 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAACA CGTCAGCTAT ACCAGTAGAA TGTTATCCGT GCATTTTCGA TCAGCTGCTT 
TCCCTTGCCA AAATTACCGG GCTTGGTCGG GAAAATGGAA AAATACTTTT TGAAGACTCG
ATGCGCTATC TCCTCGAGAC CCGAGGCGAG GGTATTGTGG TGCAACACGT TATCCGCAAT
GCCACGGACC GGGCTATAGC ATTGTCCCTG CAAGGAGAGG ATTATGATCC TTACGCCGAA
ATAAAACAGC GTTCAAACGA TATAGCGCTT GAGTTTGCCG AAGAGTTTCG TGCTACAATT
CAGAATGCTT CGGAGCCGCT GCAGGAAGCT CTGAAAATAG CCGCAGCAGG CAATATTATC
GATTTTGGTG CCAAGCAGCA TGGATCTCTC GATGTGGAAA AAGAACTGAG AACTATTGAC
GAAAGGGTTT TCGGACAGTT CGATTTTGAG GCGTTCTCCA GTCGTCTGAA CTCGGCAGTT
CGACTGCTCT ATATTTGCGA TAATGCCGGA GAGATCGTTT TCGACAAACT CTGTATCGAG
GAGATCAGGA GGCAATACCC GGAAGTGGAC ATTACCTGCG CAGTGAGACA ACGCCCGGTC
ATTAACGATG CGGTTATGCT CGATGCTCGA TATGCAGGAC TCGATGAGGT GGCCAGGGTG
GTTTCTTCGG GAAGCATTTA TCCTGGAACG CTGCTTGATG AGACATCGGA TGACTTTCGT
CAGCTGTTTG CAGAGGCTGA TCTTATTATC TCGAAAGGGC AGGGCAATTT TGAAACCCTG
CTCGATATTG CGGACGAGCG GCTCTTTTTT ATTCTGAGGA TCAAGTGTGA GCAGATGGCC
AAACTCTCCC ATGTCCTGAA AGGGGATCTC GTGCTCATGC AGGGAGGAAA GAGGGGTACT
GCTCAACCGG ACGGTTGA
 
Protein sequence
MSNTSAIPVE CYPCIFDQLL SLAKITGLGR ENGKILFEDS MRYLLETRGE GIVVQHVIRN 
ATDRAIALSL QGEDYDPYAE IKQRSNDIAL EFAEEFRATI QNASEPLQEA LKIAAAGNII
DFGAKQHGSL DVEKELRTID ERVFGQFDFE AFSSRLNSAV RLLYICDNAG EIVFDKLCIE
EIRRQYPEVD ITCAVRQRPV INDAVMLDAR YAGLDEVARV VSSGSIYPGT LLDETSDDFR
QLFAEADLII SKGQGNFETL LDIADERLFF ILRIKCEQMA KLSHVLKGDL VLMQGGKRGT
AQPDG