Gene Paes_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1546 
Symbol 
ID6458451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1686721 
End bp1687773 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content51% 
IMG OID642725536 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_002016213 
Protein GI194334353 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.208029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000817175 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTTCA GGAAATTTCG AGATTTTCGT ATTTTGGGTT TTTCCTTTAA CAAAATCATC 
CGAAACATGA GCCAGACAGA TTTACTCAGT ATCGTACACC GCCCGAGAAG GCTTCGCAGA
ACAGCTGCTA TCAGAAACCT TGTACAGGAA TGCAGCCTTT CGAAAAGCGA TCTTGTCTAT
CCGCTGTTTG TCTGTCCGGG AACCGATATC AAGGAAGAAG TCCCCTCCAT GCCCGATAGC
TTCCGCTACT CAATCGACAA TGCGGTAAAA GAGTGCCAGG AGCTCTGGGA CCTCGGCATT
CAGGCCATTG ATCTGTTTGG CATTCCTGAA GAAAAAACCG AAGACGGCCG TGAAGCATAC
AACGACAACG GTATCGTTCA GCGCGCCATC CGCGCCATCA AGGAAGCGAT TCCTGAAATG
TGCATCATGA CCGACGTCGC TCTCGACCCC TTCACACCGT TCGGACACGA CGGCCTTGTC
AAAGACGGTA TCATCCTCAA CGATGAGACC GTTGAAGTCC TCTGCAAAAT GTCCATCTCC
CACGCAGAAG CAGGCGCAGA CTTCGTCTCT CCGAGTGATA TGATGGACGG CCGCATCGGT
GCGATCCGTG AAGCACTCGA CGACGCAGGT TATTCTGACG TAGGCATTCT TTCCTATGCT
GCAAAATACT CATCGAGCTT CTACGGCCCG TTCCGCGACG CATTGCACTC CGCTCCACAG
TTCGGCGACA AATCCACCTA CCAGATGAAC CCGGCCAATG CCATCGAGGG CATGAAAGAG
ATCGAACTCG ACATCATTGA AGGCGCCGAT ATCATCATGG TTAAACCCGG TCTGGCTTAC
CTGGACATCG TCTGTAAAGC AAAGGAACGA TTCGATGTTC CGGTTGCTGT TTACCACGTC
TCAGGAGAAT ACGCAATGGT AAAAGCTGCC GCAGAAAAAG GCTGGATCGA CGGTGACCGC
GTGATGATGG AATCGCTGCT CTCCATGAAA CGCGCCGGTG CTGACATCAT CTTCACCTAC
TACGCAAAAG AAGCCGCAAA AAGGCTTTCC TGA
 
Protein sequence
MDFRKFRDFR ILGFSFNKII RNMSQTDLLS IVHRPRRLRR TAAIRNLVQE CSLSKSDLVY 
PLFVCPGTDI KEEVPSMPDS FRYSIDNAVK ECQELWDLGI QAIDLFGIPE EKTEDGREAY
NDNGIVQRAI RAIKEAIPEM CIMTDVALDP FTPFGHDGLV KDGIILNDET VEVLCKMSIS
HAEAGADFVS PSDMMDGRIG AIREALDDAG YSDVGILSYA AKYSSSFYGP FRDALHSAPQ
FGDKSTYQMN PANAIEGMKE IELDIIEGAD IIMVKPGLAY LDIVCKAKER FDVPVAVYHV
SGEYAMVKAA AEKGWIDGDR VMMESLLSMK RAGADIIFTY YAKEAAKRLS