Gene Paes_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1540 
Symbol 
ID6460391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1682043 
End bp1682792 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content50% 
IMG OID642725530 
ProductUroporphyrinogen-III synthase 
Protein accessionYP_002016207 
Protein GI194334347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.221664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00271946 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAAAT CTGTTCTCGT CACTCGCCCG AAACATCAGG CAGCGTCATT CGTTCAGGAA 
TTACAGAAAT ACGGTCTGAA CTCTGTTGTC TTTCCGACAA TAGAGATCAG ACCGGCTTCT
GACTGGAATA TTCCAGACAT CTCAACCTTT AGCGGCGCAT TTTTCACAAG TCCCAACAGC
GTCCGCTATT TTATGGAGCG TCTTACACAA GAGGCTCCTC ATGAGCTTGT CCATCTCAAG
GCGATCAAGG TCTACGCTGT GGGAAAAACG ACCGCACGTG ATCTTGCGGC CTACGGTATA
ACCACTGAGC CGGTACCGAA AGTCGCCGAT GCCGTCAATC TCATGCAGAC GATCAGCCCT
GAAGAAATAA ACGGCAAATC TTTTCTCTTT CTCAAAGGAA ACCTTTCGCT CGGCACAATT
CCTGCCGTGA TCTCAGAACG CGGTGGCTCC TGCAGTGCCG TTACCGTGTA TGAAAATCAT
CCGCCCGACC TCAACGCGAC CGAAGAGGTA AGGCAACAGA TTGAGAGAGG CGAAATCTCC
TGCATTACCT TCACCAGTCC ATCAACTGCG CAAAACTTTT TTCAGGCCAT GGGCACCACA
GTACTGCCTG AAGGCATTCT TGTCGCTGCA ATAGGACAGA CCACCGCCAA TGCGCTTGAA
AAGCTCGGTG TCAATACTGA CATCATTCCC CGATACTACG ACGCACCTCA CTTCGCAGAA
GCAATTGCCG GAGCCCTCCT TAAAGCATAG
 
Protein sequence
MMKSVLVTRP KHQAASFVQE LQKYGLNSVV FPTIEIRPAS DWNIPDISTF SGAFFTSPNS 
VRYFMERLTQ EAPHELVHLK AIKVYAVGKT TARDLAAYGI TTEPVPKVAD AVNLMQTISP
EEINGKSFLF LKGNLSLGTI PAVISERGGS CSAVTVYENH PPDLNATEEV RQQIERGEIS
CITFTSPSTA QNFFQAMGTT VLPEGILVAA IGQTTANALE KLGVNTDIIP RYYDAPHFAE
AIAGALLKA