| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1539 |
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| Symbol | hemC |
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| ID | 6460551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1681105 |
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| End bp | 1682043 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642725529 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002016206 |
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| Protein GI | 194334346 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0899347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00290857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAACAAC AGTTAATTAT CGGTACCAGA TCCAGCCCCT TGGCATTGTG GCAGGCAGAA
TTTACTAAAG CCGAATTGTC AAAAAACTTC CCGGAACTTG ACATACAGCT CAAACTCATC
AAAACCACTG GTGACGTCCT CCTTGACTCC CCTTTGTCAA AAATCGGAGA CATGGGTCTC
TTCACGAAGG ATATCGAAAA GCACCTGCTG GCAAAAGAGA TTGATCTGGC TGTTCACAGT
TTGAAAGATG TACCGACAGA GACCCCGGAA GGGCTTATAC TTTCTGCGTT TACCGAAAGA
GAAGACACCC GCGATGTCAT CATTTCCAAA AACGGTGACA ACCTGAAGCA ACTCAAACCG
AACGCAAAAA TTGCGACAAG CAGTCTGCGA AGAACATCAC AGCTTCTGGG TATAAGGCCT
GATTTTGAAA TGGGCGACAT CAGAGGCAAC CTCAACACCC GATTCAAAAG ATTCGACGAA
AGCGATTTTG ACGCTATGAT TCTTGCCTAT GCAGGTGTCC ACCGCCTCAA CTTCGGTGAC
AGGATATCGG AAATCCTCCC TCACGACGTA CTGCTTCCGG CCGTCGGCCA GGGTGCGCTG
GGTATCGAAA CCCGTATCGA TGATGAACAG ACACGCCAGA TCGTCAAGGT GATGAACAAC
CAGAACTCAG AGTACTGCAC CAAAGCCGAG CGAGCACTGC TTCGTCATCT GCAGGGTGGT
TGTCAGATCC CGATCGGCGC GTATGCCACC TATAAAAACG GTACGCTTCA CCTTTCAGCC
TTTGTAGGAT CTGTTGACGG AAAACGTGCA ATCCGCAACG AAATCACAAA AGAGAACGTC
ACAGCTCCGG AGCTGGCAGA GAAAACAGGT ATTGAACTGG CAGAAGAACT GATGAAACAA
GGTGCCAACG AGATCCTTGC AGAAATCAGA AAAATCTGA
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| Protein sequence | MKQQLIIGTR SSPLALWQAE FTKAELSKNF PELDIQLKLI KTTGDVLLDS PLSKIGDMGL
FTKDIEKHLL AKEIDLAVHS LKDVPTETPE GLILSAFTER EDTRDVIISK NGDNLKQLKP
NAKIATSSLR RTSQLLGIRP DFEMGDIRGN LNTRFKRFDE SDFDAMILAY AGVHRLNFGD
RISEILPHDV LLPAVGQGAL GIETRIDDEQ TRQIVKVMNN QNSEYCTKAE RALLRHLQGG
CQIPIGAYAT YKNGTLHLSA FVGSVDGKRA IRNEITKENV TAPELAEKTG IELAEELMKQ
GANEILAEIR KI
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