| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1528 |
|---|
| Symbol | |
|---|
| ID | 6460656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1668424 |
|---|
| End bp | 1669863 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642725518 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002016195 |
|---|
| Protein GI | 194334335 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.163365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0518301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGAAT CATATCATCA CACAACGGAT TCGAAAAAAG AAGAGTCGAA CAGAAAGAAT
AAAGTACTGG TGGCCGATGA TGAGCAATCA TCGCGCATCA TGCTTGGTCA TTTCATAAAA
AAAATGGGCT ATGAGCCCAT CTACGCCATA GACGGTGAAG AGTGTATTGA AATTCTGGAA
CGCGAAGAAA TCGATATTCT GCTTCTTGAT ATTCATATGC CGAAAAAAGA CGGATTTGAG
GTCATGACCT ACCTGAAAGA TCATAATATC CGCATCCCGG TCATTATGGT CACTGCTTCT
CATGAAATTC CCAAGACCGT ACGATGCATC AAAATGGGAG CATATGAATA CCTCACCAAG
CCACTTGACA CCGAACGGCT GCAGATCGTG CTCAGAAATG CGCTGTCGGA ATCGGAGCTG
CACGATACAG TCAAGCAGCT GCAAAAGGAA CTGAAAACAA AAGAGCTGTT CCACAACATC
ATCGGTCAGA GCCTTGCCAT CAAACAGACG ATAGAACAGG CGCTTCAGGT TATGGATACA
GAACTCAACG TCCTGATCCT CGGAGAAAGC GGCACTGGCA AGGAGCTGTT CGCACAGGCG
ATCCACGAGG GAAGCCGGCG AAAAAACGGG CCGTTTGTTT CCGTCAATTG TGCCGCCATT
TCCCACGAAC TGGCCGAAAG TCTTCTTTTC GGTCATGTAA AAGGCGCTTT TACCGGAGCC
AACAACGATC ATATTGGATT CTTTGAGCAA GCCCATAAGG GGACGCTCTT TCTCGATGAG
ATCGGGGATA TGGATGCCGA TATTCAGGCA AAAGTCCTCC GGGCTATTCA GGAAAGAAAA
ATCCGGAGGG TTGGAGAAAA AATAGAGCGG AGCGTCGATT TCCGAGTCAT TTCGGCCACA
AACAGAAACT TCACTGTGGC CATCAACAAC AACTCATTCA GGGAAGATCT CTATTACCGT
CTCGAAGAGT ATCCTATCTT CATTCCGCCG CTACGAGACA GAAAAGACGA TATCGTGCTC
ATTGCAAAGC ATTTCCTGGA AGAATTCTGC AGTGCCAACA ACATCAAGCC TCCACTCTTC
TCCAGTGAAG CCCAGGAAGA GATGAAAAAC TACCACTGGC CCGGCAATGT ACGGGAACTG
AAAAATGCCA TACAGAGAAC AGCAATCAGA AGCAAGAACC TGAACGAAAT CCATTCGGTC
ATGACACCGG GTTCAAGAGA ATACCACAAA GAAGATCTCT CCCGGCGATC AACGAATGAG
GAAGAAAAAA AGTCGCCCGT CTCATCACCG TCATCAATCG TTCCTCTTGA TCAGATGGAG
CGACAGGCCA TAGAAGACGC ATACCGCGCC TGTGGAGAGA ACCCGACAAA AACCGCCCAG
CTTCTCGGCA TTGGAAGAGC GACGCTATAC CGAAAACTCA AAAAATTCGG ACTCAACTGA
|
|---|
| Protein sequence | MLESYHHTTD SKKEESNRKN KVLVADDEQS SRIMLGHFIK KMGYEPIYAI DGEECIEILE
REEIDILLLD IHMPKKDGFE VMTYLKDHNI RIPVIMVTAS HEIPKTVRCI KMGAYEYLTK
PLDTERLQIV LRNALSESEL HDTVKQLQKE LKTKELFHNI IGQSLAIKQT IEQALQVMDT
ELNVLILGES GTGKELFAQA IHEGSRRKNG PFVSVNCAAI SHELAESLLF GHVKGAFTGA
NNDHIGFFEQ AHKGTLFLDE IGDMDADIQA KVLRAIQERK IRRVGEKIER SVDFRVISAT
NRNFTVAINN NSFREDLYYR LEEYPIFIPP LRDRKDDIVL IAKHFLEEFC SANNIKPPLF
SSEAQEEMKN YHWPGNVREL KNAIQRTAIR SKNLNEIHSV MTPGSREYHK EDLSRRSTNE
EEKKSPVSSP SSIVPLDQME RQAIEDAYRA CGENPTKTAQ LLGIGRATLY RKLKKFGLN
|
|---|
| |