| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1521 |
|---|
| Symbol | |
|---|
| ID | 6460655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1661205 |
|---|
| End bp | 1663349 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642725511 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_002016188 |
|---|
| Protein GI | 194334328 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00188531 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.582625 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAATG TTAACAAAAA AGCGGTATCA TCGTATTTTG GCGCTTTGAC CTTCGATCAG
AAGGCAATGC TGAAGAAACT GCCGAAAGAG GTGTATCAGG CACTTCAGAA AACTATAAAA
ACAGGCAACA AACTCTCTGA GGAGATCGCA GGAGCTGTCG CTCACGGTAT GAAAGAATGG
GCAATGGAAA ACGGTGCGAC CCATTACACG CACTGGTTCC AGCCTATGAC CGGTGCCACT
GCTGAAAAAC ACGATGCTTT TCTCTCTATC GACAGGGACG GTACTGCTAT CGAGCGTTTT
TCCGGCGGGC AGCTTATTCA GGGTGAACCC GATGCTTCGA GTTTTCCTTC CGGCGGGATG
AGAACGACCT TTGAGGCCAG AGGTTATACC GCATGGGATC CTTCCAGTCC GGCCTTTCTC
ATGAAAGGCG GCAAAGGCTA TACTCTTTGT GTTCCGACAG TGTTTATTTC CTACCATGGA
GAGGCCCTTG ATGAAAAGAC TCCTCTTCTT CGCTCTATGG ATGCTGTCAG TAAATCTGCT
ATCCGGCTTC TCGGTATTCT CGGCGTCGAC AACGTCAGCC GTGTTAATAC CTATGCAGGC
GCTGAGCAGG AGTATTTCCT TGTGGACCGC AAATTCTATT CGATGCGTCC TGACCTTATC
ATGAGTGGAC GGACTCTTCT TGGCGCAATG CCTCCGAAAG GGCAGCAGCT TGAGGATCAC
TACTTCGGCT CTATTCCAAA CAGGGTTCTC GAATTCATGC AGGAGGTCGA AGAGGAGCTC
TATCTGCTCG GTATTCCTGC TAAAACACGT CACAACGAGG TTGCCCCGCA CCAGTTTGAG
CTGGCTCCTA TTTTTGAACG TGCAAATATT GCCGCTGATC ACAACCTTCT TGTCATGGAG
GTCATGCGCA GAGTCGCCGA CAGAAAAGGC TTTGCTCTTC TGATGCATGA GAAACCGTTT
GCCGGAATCA ACGGTTCAGG TAAGCACAAC AACTGGTCCA TCGGTACCGC AGAGGGTATG
AATCTGCTCG AACCGGGTGA TACTCCTGAG TCGAACATTC AGTTCCTTGT CTTCCTGGCT
GCTGTGCTCA AAGGGGTGTT CAAGCGCTCT GCAGTACTGA GAGCATCGAT TGCGAGCATC
GGTAATGATC ATCGTCTCGG TGCCAATGAG GCTCCTCCTG CCGTTGTGAC TGTCTTCCTC
GGTGAGCTTC TTGAGAAAGT GCTCGATGCC ATCGAAGCCG GTAAGGTTGA TTTCGCGACC
GAGAAACAGG TTCTGAACCT TGGTCTTGCC CATCTGCCGA TTCTTAATAA AGACTATACC
GATAGAAATC GCACCTCTCC TTTTGCCTTT ACCGGCAACA AGTTTGAGTT CCGCGCTGTT
GGTTCGTCCC AGCCGATTTC TGTTCCGAAC ATGGTTCTCA ATACGCTTAT GGCGGAGGCT
ATGGATGAGC TTGCCAACGA GATTCAGGAG AAAATCGATG GTGGCGTCGA GAAGGATGCA
GCTATTCTTG AAGTGCTGCG TGCCGAGATC ACGGCAACCA AGCCTGTTCG CTATCAGGGT
GACAACTATA GTGAGAACCT TCAGGAGGCA GCTGCAAACC GCAGTCTTCC AAACCTGAAG
AATACTCCTC AGGCTCTGAG GTCGCTGCTT GAGGTTGATA CCCGGGAGAT GTTCTCCAGA
TACGGCGTGC TTTCAGACCA GGAGCTTACT TCAAGGCTCA ATACCCGTCT TGAACGCTAT
GTCAAAGGAA TCGATATCGA AGCACGAACC CTGCAGCTGA TGCTCAAGAC CTTTGTTATT
CCGGACGTGT CGGAGTATCA GGGCGAGCTT GCCAGCTCCT ACAACGCTCT GGTTGAGGCA
TCTTCCAGGA TCGGGGTTTC CGACAAAGCA CTCAAGAGCC AGGGAGCTCA TTTGAAAGAA
CTTGCTGAAA ATCTCTCTGA TCTGCTTGAT CTGACTGCCG AGCTTGATGT GGTCATCGCA
AAACTTGGCA GTGTCGGGGA AGAGTTCGAA GCGGCTGATT TCTGTGCTGA AGTCGTGCTG
CCTTCCATGG ACAAAGTCCG TGCCGTGGCT GATCATCTCG AACTGATGGT CGACCGCAGT
AAATGGGAGT TGCCGACCTA TTCCGAGATG CTCTTCGAGC ATTGA
|
|---|
| Protein sequence | MENVNKKAVS SYFGALTFDQ KAMLKKLPKE VYQALQKTIK TGNKLSEEIA GAVAHGMKEW
AMENGATHYT HWFQPMTGAT AEKHDAFLSI DRDGTAIERF SGGQLIQGEP DASSFPSGGM
RTTFEARGYT AWDPSSPAFL MKGGKGYTLC VPTVFISYHG EALDEKTPLL RSMDAVSKSA
IRLLGILGVD NVSRVNTYAG AEQEYFLVDR KFYSMRPDLI MSGRTLLGAM PPKGQQLEDH
YFGSIPNRVL EFMQEVEEEL YLLGIPAKTR HNEVAPHQFE LAPIFERANI AADHNLLVME
VMRRVADRKG FALLMHEKPF AGINGSGKHN NWSIGTAEGM NLLEPGDTPE SNIQFLVFLA
AVLKGVFKRS AVLRASIASI GNDHRLGANE APPAVVTVFL GELLEKVLDA IEAGKVDFAT
EKQVLNLGLA HLPILNKDYT DRNRTSPFAF TGNKFEFRAV GSSQPISVPN MVLNTLMAEA
MDELANEIQE KIDGGVEKDA AILEVLRAEI TATKPVRYQG DNYSENLQEA AANRSLPNLK
NTPQALRSLL EVDTREMFSR YGVLSDQELT SRLNTRLERY VKGIDIEART LQLMLKTFVI
PDVSEYQGEL ASSYNALVEA SSRIGVSDKA LKSQGAHLKE LAENLSDLLD LTAELDVVIA
KLGSVGEEFE AADFCAEVVL PSMDKVRAVA DHLELMVDRS KWELPTYSEM LFEH
|
|---|
| |