| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1508 |
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| Symbol | lysS |
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| ID | 6458924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1649131 |
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| End bp | 1650675 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642725498 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002016175 |
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| Protein GI | 194334315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.781573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG CACAGGACAC GAATCTCCAT GACAGCCCGT ATAGCCAGGA GAGCGAACAC
AAAGCCCTCA ATGATCAGAT GCACAGACGC CTTGAAGAAC GAAAGCTGCT TGAAGAAGAA
GGCGTCAGAC CATACCCCTA CGGGTTCGAC GTAACGAGGC ATTCCAGAGA TATCAAAGAG
AACTTCCTTG AAGAAACACC TGAAACGGTA TCAGTTGCCG GTCGTATCAT GGCCGTCAGA
AAAATGGGAA AAGCCTCGTT TTTCAACATT CAGGATGCAA AGGGACGCAT ACAGGTCTAC
ATGAAACGCG ACGATGTCGG GCAGGATGCA TACAGGATAT TCAAACTGCT TGATATCGGT
GATATTGTCG GCGTCAAAGG GTTCACGTTC AGAACCAAAA CCGGTGAAAT CTCGATCCAC
GCCGAAGAGT TCATGCTTCT GAGTAAATCG CTCAGGCCTA TACCTGTCGC CAAAGAAAAA
GAAGTTGACG GCCAGAAAGT CACCTATGAC GCATTCAGCG ACAAGGAACT GCGCTACCGT
CAGCGTTACG TCGACCTGAT TGTCAATCCT GAAGTAAGAA ATACGTTTGT CAAGCGCTCC
GCGATCGTCA CCTTCATGCG TACCTTCTTT TCTGAAAAAG GATACCTTGA AGTCGAAACG
CCTATTCTCC AGCCGGTCTA CGGTGGTGCA GCAGCACGGC CGTTCACAAC ACACCATAAC
GCGCTGGACA TGGAGCTCTA CCTCAGGATC GCCAATGAGC TGTATCTCAA GCGGCTTATC
GTAGGCGGTT TTGACGGTGT CTTTGAATTT GCCAAAGACT TCCGCAACGA AGGCATTGAC
CGCTTTCACA ATCCTGAATT CACTCAGGTA GAACTCTATG TCGCCTACAA GGATTACTAC
TGGATGATGG AACTGGTCGA ACAGCTCATC TACCGGGCCA ACCTTGCTGT CAACAACAGC
GAGAACACAA CGTTTCTCGA CAATGAGATC TCGCTCAAGC CTCCATTCAC GAGGCTCTCG
ATCGCTGATG CCATCATGCA GTACTGTGAC CGCGATATCA GCGGGAAGTC TGAATCCGAA
CTGAGAAACA TCGCCAAGGA TCTCGGACTG GAACTCGACC CGAAAATCAG CAGCGGAAAA
ATCATTGATG AAATCTTCGG TGAGTTCGTT GAGCCAAAGC TCATCCAGCC GACATTCATT
ATGGATTATC CGACAGAAAT GTCACCGCTG GCAAAAGAAC ACCGTTCAAA AGAGGGTGTC
GTCGAGCGAT TTGAGCTGAT CGTCGGAGGC AAAGAGCTCT GTAATTCCTT CTCCGAACTC
AATGATCCGG TCATTCAGCG CAACAGACTC GAAGAACAGG CAAAACTCCG TCTTCGCGGG
GACGATGAAG CCATGGTGGT CGATGAAGAT TTTCTTCGCG CCCTCGAGTA CGGCATGCCG
CCGTGCGCTG GCCTCGGCAT CGGCATCGAT CGACTGGTCA TGCTTCTGTG CGGCGAAGAA
TCGATCAGGG ATGTCATTTT CTTTCCTCAT CTGAAACCGG AATAA
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| Protein sequence | MTDAQDTNLH DSPYSQESEH KALNDQMHRR LEERKLLEEE GVRPYPYGFD VTRHSRDIKE
NFLEETPETV SVAGRIMAVR KMGKASFFNI QDAKGRIQVY MKRDDVGQDA YRIFKLLDIG
DIVGVKGFTF RTKTGEISIH AEEFMLLSKS LRPIPVAKEK EVDGQKVTYD AFSDKELRYR
QRYVDLIVNP EVRNTFVKRS AIVTFMRTFF SEKGYLEVET PILQPVYGGA AARPFTTHHN
ALDMELYLRI ANELYLKRLI VGGFDGVFEF AKDFRNEGID RFHNPEFTQV ELYVAYKDYY
WMMELVEQLI YRANLAVNNS ENTTFLDNEI SLKPPFTRLS IADAIMQYCD RDISGKSESE
LRNIAKDLGL ELDPKISSGK IIDEIFGEFV EPKLIQPTFI MDYPTEMSPL AKEHRSKEGV
VERFELIVGG KELCNSFSEL NDPVIQRNRL EEQAKLRLRG DDEAMVVDED FLRALEYGMP
PCAGLGIGID RLVMLLCGEE SIRDVIFFPH LKPE
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