| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1499 |
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| Symbol | |
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| ID | 6458939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1640444 |
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| End bp | 1641694 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725488 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002016166 |
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| Protein GI | 194334306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000178536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.848919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGATT CAAGGTTTTT TTCATATAAG GATACTGTGC TCTCTTGTGA AGGAGTTGCT
CTCGATGCCC TTGCGGCAGA GTACTCCACT CCATTGTTTG TCGTGAGCCG TAACGCTCTT
GTTGAGCAGT ACAGGGCTTT TGAGGAGGCT TTTTCTTCTC TCAGTCATTT TACCTGCTAT
TCGGTCAAGG CAAACTTCAA TATTCATGTT ATCAAGGCTC TCTCCGATCA AGGCTGCGGT
TGTGACGTCA ACTCGGGAGG AGAGCTTTTC AGGGCCCTTA AAGCAGGGGT GGATCCGCAG
AAGATCATTA TGGCAGGTGT TGGTAAAAGC GATCAGGATA TCGAGTACGC TTTGCAATCA
GGCATTTTTA TGCTGAAGGC TGAATCTCTT TCCGAATTGC GCCACATCGA AGCTGTTGCC
CGGCGACTTG GTGTGACAGC TTCGGTCGGT GTTCGCATCA ATCCTAATGT AACTGCTGAA
ACGCACCCTT ATATCACGAC CGGCGACAGT AAAGAGAAAT TCGGCATTGA TGAGGGGTCA
TTGGACGAGA TGTTCGATCT GTTCAAGTCG ATGAAGCATG TCAATTTCAT GTGTCTGGAT
ATGCATATTG GTTCCCAGAT TTTCGATACG GAATTTTATC ATGCAGCAAC AGAGAAGCTT
CTCGATGTAC TCGACGCGGC CCGTGCCAAA GGGTTTTCGA TCGACTATCT CGATATCGGG
GGAGGATTTC CGGTCACCTA TGAACCGCAG AAGCCGGCTA CGCCGATCGA GCAGTTTGCC
TCGGTTCTGA TCCCTGTTCT CAAAAAAACG GGAACGACGA TCATTTTTGA ACCAGGGCGG
TTTATTGCCG CTAATTCAGG CGTTATGGTG ACAAAGGTGC TCTATCGCAA ACGCAATCAT
ATTGGCAAGG AGTTTGTCAT TGTTGATGCC GGCATGACTG AACTGATTCG GCCTGCGCTC
TATCAGTCCT ATCATGAAAT CATCGGTGTC AAGCAGCAGG AGGCGACCAT TGTTGCCGAT
GTCGTTGGTC CTGTTTGTGA ATCGGGCGAC TTTTTTGCCA GAGGCAGGAC CATTGATGCT
GTCGGGGAAG GAGAGTACCT TGCAATTCTA TCAGCAGGAG CGTATGGTGC CGTTATGAGT
AATAATTATA ACGGACGTCT GCGTCCGGCC GAGGTGATGG TCGATAACGG CCGGACCAGT
CTGATTCGCA AGCGGGATAC TTTCGAGCAG CTCATTGAGA ATGAGGTTTG A
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| Protein sequence | MLDSRFFSYK DTVLSCEGVA LDALAAEYST PLFVVSRNAL VEQYRAFEEA FSSLSHFTCY
SVKANFNIHV IKALSDQGCG CDVNSGGELF RALKAGVDPQ KIIMAGVGKS DQDIEYALQS
GIFMLKAESL SELRHIEAVA RRLGVTASVG VRINPNVTAE THPYITTGDS KEKFGIDEGS
LDEMFDLFKS MKHVNFMCLD MHIGSQIFDT EFYHAATEKL LDVLDAARAK GFSIDYLDIG
GGFPVTYEPQ KPATPIEQFA SVLIPVLKKT GTTIIFEPGR FIAANSGVMV TKVLYRKRNH
IGKEFVIVDA GMTELIRPAL YQSYHEIIGV KQQEATIVAD VVGPVCESGD FFARGRTIDA
VGEGEYLAIL SAGAYGAVMS NNYNGRLRPA EVMVDNGRTS LIRKRDTFEQ LIENEV
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