Gene Paes_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1487 
Symbol 
ID6460543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1626490 
End bp1626954 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID642725476 
Productmembrane protein 
Protein accessionYP_002016154 
Protein GI194334294 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0187632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.771224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG ACAGCCACCA TCAATCGCTC AAATACCACG AAGAGATCCC TCCGGAACAT 
GACGATCGGC TGATATCGTT TCTGCACAGG GTCATCCGTT TCGCCGTAAA AATACTGGCC
CTGCTCATGG TGCTCGTCAT TATCTGGGGC ATCGGTGATG TCGTCCATGT TCTCTATATC
AGGCTCAACC AGCCTCCGTT CCTCCTGCTC AACATCAACG ATCTGCTTGA AACGTTCGGT
GCATTTCTTG CCGTGCTTAT CGCCATAGAA ATTTTCATCA ACATCCGTCT CTACCTCGGG
ACCAACATCA TTCCGGTGAA GCTTGTCGTA GCGACAGCCC TGATGGCTAT ATCGAGAAAA
GTCATCATTC TTGATCTGGA CAAGCTGAGT GCCGATTATC TGGTCGGCAT TGCTGCCGTA
GTGCTTGGGC TCGGCCTCTC CTACTGGGTC ATCACGAAAG AGTAG
 
Protein sequence
MKKDSHHQSL KYHEEIPPEH DDRLISFLHR VIRFAVKILA LLMVLVIIWG IGDVVHVLYI 
RLNQPPFLLL NINDLLETFG AFLAVLIAIE IFINIRLYLG TNIIPVKLVV ATALMAISRK
VIILDLDKLS ADYLVGIAAV VLGLGLSYWV ITKE