Gene Paes_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1478 
Symbol 
ID6460599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1617497 
End bp1618066 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID642725467 
Producthypothetical protein 
Protein accessionYP_002016145 
Protein GI194334285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.840474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.345122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTTACTCAAT GGTGTCATTT TTACTGCTGC TTGTTCTCGC ATCATGTTCA 
AGCGTTTCAG TTGTTTCGGA TTACGACAGG GTTTTCGATT TCAGCCGATT CCAGACCTAT
CGCTGGCCGA TAGCGGGAGA AGGCATCAGG CAGGGTGACC TGCTTGTTCA GAATCCTCTG
GTCTACAAAA GGGTCCAGAG TGCTGTCGAC CGGGAGCTTC AGCAGAAAGG TTTTCACAGG
AGTTCGTCAG AGAGTGCCGA TTTCATCCTT CATGTGCACG CAGGAGTCAA ACAGGTCAAA
AGCTATCAGC CGCACTATGG GGTGGCATTT CCTTTACGGG GAGGCTGGTA CCGTCCCTGG
TGGGGAGCCT ATGGAGGCTT CACCTCTGTG AGTTACTATG AAGAAGGCAC CCTGGTTGTT
GATATCATCG ATGCCGGTAC TAAAGATATG GTCTGGCGGG GCATGGCGAA AAGAATCGTC
AGGCAATACG GCAGTCCCGA AGCCATGCAG AAGGATATCG ACGATGCTGT CAGGCGTGTT
CTGGCCGAAT TTCCTCCGTT GCGTCAATAA
 
Protein sequence
MKKVYSMVSF LLLLVLASCS SVSVVSDYDR VFDFSRFQTY RWPIAGEGIR QGDLLVQNPL 
VYKRVQSAVD RELQQKGFHR SSSESADFIL HVHAGVKQVK SYQPHYGVAF PLRGGWYRPW
WGAYGGFTSV SYYEEGTLVV DIIDAGTKDM VWRGMAKRIV RQYGSPEAMQ KDIDDAVRRV
LAEFPPLRQ