Gene Paes_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1477 
Symbol 
ID6458528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1616319 
End bp1617146 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content53% 
IMG OID642725466 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_002016144 
Protein GI194334284 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.364257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTT ATCGGCGAAA TGAAAATGTT TTCAGCACTA TGAGTTCCTT GTTCCCACAG 
GTCTATTATG TGTCGAGCGG CGCTCGTCAA GGGGAGTGGA ACATGGCGTT TGACAGGAAA
CTCGTGGAGG TATTCAGTGA TGGTCGTTTT CAGAGACGAT TTGGCGAGGG AAGCGCTCTC
TGGCGGTTTT ACGCATGGCA TCCATCAGCG CTCTCTCTCG GCTATGGCCA GGACCCTGAA
TCAGTTGACC GGCAGCGTTG TCTTGCTATG GATATTGATG TTGTCCGGAG GCCGACAGGG
GGACGCGCGG TTTTGCATGC CGATGAATTC ACCTACTCAT TTCTTGCTTC GACCAGGGCA
CCGGATGCTG AGGTTTACCG GGTGGTTCAC GATGTTCTTC TTGCCGGATT GAAGAGGCTC
GGGGTCAATG CCGGTTTTTG CCGGACCAAT CCTGACTTTC GCCGTCATTA CCGGACCGGG
CAGTCGGTAA GCTGCTTTAC GGCGTCGGCA AAATATGAAC TGCAGGTGGA TGGCCGCAAA
ATTGTCGGTT CGGCACAGCG CAGGAGCGGG CCAGTGATTC TTCAGCACGG CTCGCTGCTT
CTTTCAGAGC GTCACAAGCT GATTCGTGAA CTGATCGCTA TCTCCGATAG CGATGTTCTG
GCCGCCGTTA CCGCTGATCT GGACAGTAAA ACAGTTTCAG TGGCTGAGAT TATAGGCTAC
GTGCCTGATT TTTCCGATCT GCTCGATGTT ATGACACAAG CCCTTGATGC AAGCTGGCTG
ACGGTCGCCA GGCCTCTTGA TGTCCGGGAT CTTGAAGCCC TATTTTGA
 
Protein sequence
MALYRRNENV FSTMSSLFPQ VYYVSSGARQ GEWNMAFDRK LVEVFSDGRF QRRFGEGSAL 
WRFYAWHPSA LSLGYGQDPE SVDRQRCLAM DIDVVRRPTG GRAVLHADEF TYSFLASTRA
PDAEVYRVVH DVLLAGLKRL GVNAGFCRTN PDFRRHYRTG QSVSCFTASA KYELQVDGRK
IVGSAQRRSG PVILQHGSLL LSERHKLIRE LIAISDSDVL AAVTADLDSK TVSVAEIIGY
VPDFSDLLDV MTQALDASWL TVARPLDVRD LEALF