Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1469 |
Symbol | aspS |
ID | 6460558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1606991 |
End bp | 1608817 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725458 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002016136 |
Protein GI | 194334276 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000021993 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTAG CGCCTGGAAC TGAAACCGAT TTACAGAATC GATTTCGTTC GCACTTTTGC GGACGTTTAA ACACCGAATA TGAAAATAAA CAGGTCCGGC TTGCCGGCTG GATCCATAGA AAACGCGACC ACGGAGGTTT GATCTTTATT GATCTTCGCG ATCACACCGG CATTGCTCAG CTGATTATTC AGCCGGAGAA ACAGGAGCTC TTCCAGAAAG TTGAGCGTCT TCATGTCGAG TCGGTTATCG CTGTTCAAGG TACCGTCGTC AAGCGTTCGG AGGAGACGCT CAACTCCCGG ATTCCATCAG GAGCCATCGA GGTTCTCGTC GATGATGTCC AGGTTGAAAG CCATGCCGTT GCGCTGCCGT TCCCTGTTGC CGATGAACTT CAGACATCCG AAGAACTTCG CCTGACCTAT CGTTTTCTCG ATTTGCGCAG AGAAAAGATT CATCAGAACA TTGTTTTTCG CAGTCAGCTG ATCAGCAAGG TACGCCGCTA TCTCGAAGAC CATGGGTTCA TGGAGATCCA GACACCTATT CTTACAGCCA GTTCACCCGA GGGTGCCAGG GATTTTCTTG TACCGAGTCG ACTTCATCCC GGTAAATTTT ACGCTCTTCC TCAGGCTCCG CAGCAGTTCA AGCAGCTGTT GATGGTATCC GGTTTTCCTC GCTATTTCCA GATCGCTCCC TGCTTCCGCG ATGAAGATGC TCGCGCCGAT CGCAGCCCCG GTGAGTTCTA TCAGGTCGAT ATGGAGATGG CATTTATCGA GCAGGATGAC CTGTTCGAAA TCCTTGAAGG GATGTTGCGT TACCTTACCG AAACGATGAG CACGAAACGG ATCACTCAGT TTCCGTTTCC GAGGCTCAGT TACCGCGATG TCATGAACCG TTTTGGTTCC GATAAGCCTG ATCTTCGTGT CCCGCTTGAA ATGCAGGATG TTACCGAGCT CTTTGTTGGT TCATCGTTCA AGGTGTTTGC GTCAAACACC AAAGAGGGAA GCTGCATCAA GGCAATGGTG CTTAAAGGCA GGGGAACCGA GTCCCGTCAG TTTTACGATA AAGCAGAAAA GCGGGCCAGA GAGCTTGGTG CACCGGGACT TGCTTATGTC CAGTACAGAG AAGAGGGGCC GAAAGGGCCG ATCGTCAAGT TTCTTTCAGA GGCCGAGCTC AGTGCATTGC AGGAGCGTCT GGCTATAGAA ACAGGCGACG TTGTTTTCTT CGGCGCCGGC AAGTGGGAAA AAACCTGCAA GATCATGGGC GGTATTCGGG AATACTTCTC CGACCTCTTT GAGCTTGACC GCGATGAACT CTCTTTCTGC TGGATTGTCG ACTTTCCTCT GTACGAATTC GATGAAAAAG AGAGCCGGAT CGACTTCTCG CACAATCCAT TCTCAATGCC TCAGGGAGAG ATGGATGCGC TCGATACCAT GAACCCGCTT GATATCCTTG CCTATCAGTA TGATATCGTC TGTAACGGGA TTGAGCTTTC CAGCGGCGCT ATCCGTAACC ATCGCCCCGA TATCATGTAC AGGGCATTTG AGATAGCAGG TTACAGCAAA GAGGAGGTTG ACAAGCGTTT TGGGCACATG ATCGAGGCGT TTAAAATGGG AGCTCCTCCC CATGGTGGCA TCGCTCCGGG TCTTGATCGT CTGGTTATGA TCCTGCGCGA TGAACACAAT ATTCGTGAAG TTATCGCTTT TCCGATGAAC CAGCAGGCTC AGGATCTGAT GATGTCAGCG CCATCAGATG TTTCGCGCCT GCAGCTGCGT GAGCTGCACC TTAAGCTCGA CCTGCCGGTT GAAACGGCAG AGCAAGAGCC GGGGTGA
|
Protein sequence | MSLAPGTETD LQNRFRSHFC GRLNTEYENK QVRLAGWIHR KRDHGGLIFI DLRDHTGIAQ LIIQPEKQEL FQKVERLHVE SVIAVQGTVV KRSEETLNSR IPSGAIEVLV DDVQVESHAV ALPFPVADEL QTSEELRLTY RFLDLRREKI HQNIVFRSQL ISKVRRYLED HGFMEIQTPI LTASSPEGAR DFLVPSRLHP GKFYALPQAP QQFKQLLMVS GFPRYFQIAP CFRDEDARAD RSPGEFYQVD MEMAFIEQDD LFEILEGMLR YLTETMSTKR ITQFPFPRLS YRDVMNRFGS DKPDLRVPLE MQDVTELFVG SSFKVFASNT KEGSCIKAMV LKGRGTESRQ FYDKAEKRAR ELGAPGLAYV QYREEGPKGP IVKFLSEAEL SALQERLAIE TGDVVFFGAG KWEKTCKIMG GIREYFSDLF ELDRDELSFC WIVDFPLYEF DEKESRIDFS HNPFSMPQGE MDALDTMNPL DILAYQYDIV CNGIELSSGA IRNHRPDIMY RAFEIAGYSK EEVDKRFGHM IEAFKMGAPP HGGIAPGLDR LVMILRDEHN IREVIAFPMN QQAQDLMMSA PSDVSRLQLR ELHLKLDLPV ETAEQEPG
|
| |