| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1464 |
|---|
| Symbol | |
|---|
| ID | 6459092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1601506 |
|---|
| End bp | 1602240 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642725451 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_002016131 |
|---|
| Protein GI | 194334271 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.737315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAG TTGCCATTAT CGCAGCCAGC GGCGTAGGAA AAAGAATGAA CCTCCGCAAC
GGACTGAGCA AGCAGTTTCT CGAAATCGGA GGATATCCGG TTATCTACCA CACACTTGCT
GCCTTTCAAC GCGCCAGCTC TATCGACAAG ATCTACATAG CGACAAAGCC TGACAGTATT
GCAACACTTG AAACTCTTGC CGAAGAACAC CAGTTCAGCA AGATCAATGC CATTATTGCA
GGCGGAAAGG AACGTCAGGA CTCGATCAGC AACTGCATAG AATTGATTGC CTTGCACATT
GAAAAAGCCG AAATCGACCG GCCAGACACC ATTCTGGTGC ATGACGGAGC GCGCCCGTTC
ATCACACCCG ATGAAATCGA TCAAATTGCA CAACTGTCAC ACCACTACGG TGCCTGCGTA
CCGGCGACAA AGCCAAAAGA CACGATCAAA TACATATCAG ATCAACCCGG ATTTTTCGGC
GAAACGCTTG ATCGAAGTCT TCTCCTGCAG GTGCAGACGC CTCAGGGCTT CGCTTCAGAA
AAGCTCGTTG AAGCCCACAG GAAAGCTCGT GAGGCAGAGT CCTATGCGAC TGACGACGCT
GCGCTGGTAG AAAAGTTTTT CCCCGATCAG AAGATCAAGG TCTTTGAAAT GGGCTACCAC
AATATCAAGA TTACAACCCC TGAAGACATC TTTCTCGGCG AAGCGATCTA CGCACAGCTT
CAGCAGCAAT CCTGA
|
|---|
| Protein sequence | MSSVAIIAAS GVGKRMNLRN GLSKQFLEIG GYPVIYHTLA AFQRASSIDK IYIATKPDSI
ATLETLAEEH QFSKINAIIA GGKERQDSIS NCIELIALHI EKAEIDRPDT ILVHDGARPF
ITPDEIDQIA QLSHHYGACV PATKPKDTIK YISDQPGFFG ETLDRSLLLQ VQTPQGFASE
KLVEAHRKAR EAESYATDDA ALVEKFFPDQ KIKVFEMGYH NIKITTPEDI FLGEAIYAQL
QQQS
|
|---|
| |