Gene Paes_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1463 
Symbol 
ID6458721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1600444 
End bp1601484 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content48% 
IMG OID642725450 
ProductS-adenosylmethionine/tRNA-ribosyltransferase- isomerase 
Protein accessionYP_002016130 
Protein GI194334270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.589068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTT CAAATTTTCG TTACAGTTTA CCGAAAACAA AGATAGCAGA CCGCCCGGTA 
TCACCTCGAG ACTCCAGCAA ACTGATGGTC CTCAACCGTC GTAAAAAAGA GATCGAGCAC
AAGACATTTG GCGACATCGT CTCTTTTTTC AAAAAAGGCG ACCTGCTTAT TCTCAATAAC
AGCAGAGTAT TTCCTGCAAA AATTTTCGGT CAGAAAGAAA AAACCGATGC CAAAATAGAA
GTGTTTCTCT TGCGCGAGCT CAACAAAGAA GCCGGTTTAT GGGATGTCCT TGTTGATCCT
GCAAGAAAAG TCCGCGTAGG AAACAAGATT TATTTTCAGG ACGATGTTGT CGCCGAAGTG
GTTGACAATA CCACTTCGAG AGGCAGAACA ATACGCTTCC TGAATCCGGA AATAGACGTC
TTTGATCTGG TTGAAAAGAT AGGAACCGTA CCGCTGCCCC CCTACTTCTC CCGCAAGCCT
GACGCCGGGG ACAGAGAGGA TTACCAGACG GTCTACGCTT CGCAAACAGG AGCCGTTGTC
GCTCCGATGG CAGGTCTTCA CTTTACCATG CCGCTTCTTG AGGCGATCAA GAAAAAAGGG
GTTAAAATCC TGCCGATCAC CCTGCACCCG AGCCTGAGCT CGTTCAATGC CATCGAAGTC
GAAGATGTGT CAAAACACAA AATGGACTCG GAATACTTCA ATATTCCCTA TCAGACGGCA
ATGGAGGTCA ACGAAACAAA GCTCAACAAA TCCGGCCGCA TCATCGCTGT AGGAACCACG
ACCTGTCGTG TCCTGGAAGC AAATGCGACC GTTGAAGGAA AAATTAAATT CGGGCAGGGC
TGGACAGATA AATTCATCTA TCCTCCTTAC CAGTTCAAAG TCACCGATGC CCTGGTGGCA
AACTTCCAGC AGCCGGAAAC GACCCTGCTC ATGATGGTCA GTGCCTTCGC GGAACACCGC
TTTCTGATGG ATTCCTATAA AACCGCCATG AAGGAAAACT ATCGCTTTCT GGCCTATGGC
GATGCCATGT TTATTCATTA A
 
Protein sequence
MRLSNFRYSL PKTKIADRPV SPRDSSKLMV LNRRKKEIEH KTFGDIVSFF KKGDLLILNN 
SRVFPAKIFG QKEKTDAKIE VFLLRELNKE AGLWDVLVDP ARKVRVGNKI YFQDDVVAEV
VDNTTSRGRT IRFLNPEIDV FDLVEKIGTV PLPPYFSRKP DAGDREDYQT VYASQTGAVV
APMAGLHFTM PLLEAIKKKG VKILPITLHP SLSSFNAIEV EDVSKHKMDS EYFNIPYQTA
MEVNETKLNK SGRIIAVGTT TCRVLEANAT VEGKIKFGQG WTDKFIYPPY QFKVTDALVA
NFQQPETTLL MMVSAFAEHR FLMDSYKTAM KENYRFLAYG DAMFIH