| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1401 |
|---|
| Symbol | |
|---|
| ID | 6460432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1523234 |
|---|
| End bp | 1524076 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725386 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002016069 |
|---|
| Protein GI | 194334209 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0891461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.79487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATAC CTGATACCCC TTTTAATCCT GCTTCTGCTG ATTTTTTTGG TATCTATCCT
CTTACGCGCT CTTTGCCGGA ATTGCAGGAT CTTTCAGTCC GATTCACTCT TTTTCATATT
GTCTGGTTTA CCGGAGAGTC TTCTTCGCAA TATGTGATTG ATTTCGAGCG ATATCCCATT
GCGGCCGACA GTCTCTATTG CCTCGGCCCC TGGCAGGTGC ATAGGGTTTC CGGTGAGCCT
GCCGAAGGGA TACGGATCAT TTTTTCCGGT GACATTTACG GCGATGTTGT CAATGATGAT
GTTCGCTGGC TGTTTAATCC TCTGGTCAAT GACGGGGTCA GGCTCAAGGC TGATATTGTC
GAACCTTTAC GAATGCTGCT GCGTCTTATG GTACGCGAGT CCTCTGGTGC AGGTGAGACA
GATATGCTCA AGGCCTATCT CAAAGCTTTT CTTTTGCATC TGATCCGCTC CGGGTCTGGC
GAAAGGATTT CGTTCGGTGT CGATGCGGCG CGCCTCATGA TCCTTTTTTC TCTTGTCGAT
ACGCACTACA GGAAGGAGCG CAAGGTCTCC TTTTATGCGT CAAGGATAGG GTTAAGTCCG
AAGCGTCTCA ATGAGATTCT CAAAATGGCT ACCGGTTTGA CGCTGACCGC TCTTCTTCAT
TACCGGCTGA TTATCGAGGC CCGGCGCCAG ATCAGTTACG GTAAGAGGAA TTTCAAGGAG
ATCGCTTTTG ATCTGGGCTT CAGTGAACAG GCCTATTTCA GCAGGTTTTT TAAGAAAAAG
ACAGGACAGA CGCCCGAAGC CTTTCGGCAG CAAATGTTCA AATTGTCCAA ACAAAGCGGC
TGA
|
|---|
| Protein sequence | MIIPDTPFNP ASADFFGIYP LTRSLPELQD LSVRFTLFHI VWFTGESSSQ YVIDFERYPI
AADSLYCLGP WQVHRVSGEP AEGIRIIFSG DIYGDVVNDD VRWLFNPLVN DGVRLKADIV
EPLRMLLRLM VRESSGAGET DMLKAYLKAF LLHLIRSGSG ERISFGVDAA RLMILFSLVD
THYRKERKVS FYASRIGLSP KRLNEILKMA TGLTLTALLH YRLIIEARRQ ISYGKRNFKE
IAFDLGFSEQ AYFSRFFKKK TGQTPEAFRQ QMFKLSKQSG
|
|---|
| |