| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1400 |
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| Symbol | |
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| ID | 6458856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1521893 |
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| End bp | 1523092 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642725385 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002016068 |
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| Protein GI | 194334208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000127527 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.840586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TCAGAAAACG ATTGAGTTCG TTTTGCCTTG GCAGTACGAT ACTGCTTCTC
TCGCTTTCAG GGTGTGAGGG GCAAAATGCC AGGCAGGCTG CCAATCAGCA GCAGCCGCCT
TCCCTTCCTG TCATGAACGT GATGCGTTCT TCCGTCAGCG TCAATCAGGA GTATGCCGCA
TTGATTGAGG GTGTTACTAC TGTCGAAATA AGACCTCAGG TTGAGGGTGT TTTGAAGGAG
ATCGCTGTTG ACGAAGGGGC GTATGTCAAC AAGGGAGATC TGCTGTTCAC TATTGATGAC
CGGATATATC GCCAGGAGCT GCAGACTGCT GTGGCGGCAA AGAAGTCGGC AGAGGCCGCT
CTTGCAATCG CTGCTCTTGA TGTTGAAAAG CTCAAGCCTC TGGTGCGCAA CAACGTGGTT
TCAGAGGTGC AGCTTCAAGA GGCCCGGGCT CATCTGCGTG CAGCGAAGGC CGCTCTCGAT
CAGGCTGCAG CAAAGGAGCA AATAGCCCGG ATCAATCTCG AGTATAGCAG CATAACGGCA
CCAGTCAACG GTTATATCGG TGCGATAGCG TTTCGGACGG GCAGTCTTGT GAGCCGCAAC
CAGTCGGATA AGCTGACGAC GCTCTCCGAT GTCCATCAGG TCAGAGCGTA TTTCAGCATG
AGCGAAGTTG ATTTTGTCCG TTTTCGGCAG CGCTATCCAG GCGGGTCAAT TGAAGAGCCG
CTTTCAGCCG TGCCTCCGGT GCATCTCCTG CTGGCTGACG GCACTACTTT TGGCAACGAG
GGCCGGCTTG ATGCGATCAA CGGGCAGTTC GACCGCACGA CAGCATCTGT TACCCTTCGG
GCGACTTTTC CGAATCCCGA TGGGCTTCTC AGGTCGGGCA ATACGGGTAA AGTTGTGATT
GGTTATACGT ATGACGATAT CATTCTTGTT CCGCAGTCGG CAACGTCGGA TCTGCAGGAC
AGGATTTTTG TGAGCAAGGT CAACGAGGGC AATGCTGTGG CGCGTACCCC GGTGACGGTT
ATCGGACGGA GCGGAAATGA TTATATCGTC AGTGGAGGTC TTGAGGATGG TGATATGATT
ATTCTCTCAG GCTTCAGCCG TCTGCCTGAC GGAACGGTCA TCAGTCCGCT GCAGAAGGCC
GGAGAGGAGA GTGCGCTTCC TGAAGAAGAA CTGAAGATCA ACGAGAAAGA GGGCGTGTAA
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| Protein sequence | MTNIRKRLSS FCLGSTILLL SLSGCEGQNA RQAANQQQPP SLPVMNVMRS SVSVNQEYAA
LIEGVTTVEI RPQVEGVLKE IAVDEGAYVN KGDLLFTIDD RIYRQELQTA VAAKKSAEAA
LAIAALDVEK LKPLVRNNVV SEVQLQEARA HLRAAKAALD QAAAKEQIAR INLEYSSITA
PVNGYIGAIA FRTGSLVSRN QSDKLTTLSD VHQVRAYFSM SEVDFVRFRQ RYPGGSIEEP
LSAVPPVHLL LADGTTFGNE GRLDAINGQF DRTTASVTLR ATFPNPDGLL RSGNTGKVVI
GYTYDDIILV PQSATSDLQD RIFVSKVNEG NAVARTPVTV IGRSGNDYIV SGGLEDGDMI
ILSGFSRLPD GTVISPLQKA GEESALPEEE LKINEKEGV
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