| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1399 |
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| Symbol | |
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| ID | 6460157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1518722 |
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| End bp | 1521889 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642725384 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002016067 |
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| Protein GI | 194334207 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00114728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATC GATTTATTAA CAGACCGGTT CTGGCAACGG TTATATCGGT ATTTTTTGTC
CTACTCGGTC TGATCGGTAT CAGCCAGCTG CCGCTGACCC AGTTTCCCGA TATTGCACCG
CCAAGTGTTT CGGTATCGAC ATCCTATCCG GGAGCCAGTG CAGAAACGAT CGCCCGTTCT
GTAGCCCCTT CGCTCGAGGA GGCTATTAAC GGTGTCGAGG ATATGACCTA TATGACCTCG
ACATCGAGTA ATGACGGGTC GTTGAATATC AGTGTGTTTT TCAAACTTGG TACTGATCCG
GACCAGGCGG CGGTCAACGT TCAGAACAGG GTGTCGAGGG CGACAAGTCA GCTGCCGGAG
GAGGTTCGCA ACATTGGTGT GACGACATCG AAAAAGCAGA ACAGCATGAT TATGCTGATA
ACGCTTTACA GCGATGATCC GGACACCTAT GACGCCACGT TTCTGCAGAA CTATGCAAAA
ATCAACCTGA TTCCTGAAAT TCAGCGGGTT AACGGCGTCG GTCAGGCCAG CGTGTTTGGT
TCAAAGGACT ACTCGATGCG TATCTGGCTT GAGCCTGCCC GGATGGCGGC TTACAGGATC
ACTCCCCAGG AGGTGATCAG TGCTGTTCAG AACCAGAATC TCGAAGCTGC ACCAGGCCGT
TTTGGCGAAG GCAGCCGTGA GGCGCTTGAG CTGATCATTC GTTATAAGGG CAAAATGAAA
GAGCCTTCGG ACTATGAGGG CATCGTTCTT CGTGTCAATG CCGATGGTTC GCTCCTGCGT
CTTCGTGATA TAGCAAGGGT TGAACTTGGT TCCTACAGCT ATGCTGTTCA GGCGGATGCG
AACGGCAAAG AGTCTGTCAC CATGGCAATC TACCAGTCTG CCGGCTCTAA CTCGAACGAT
ATCCAGATCG GTTTGCAGGC GGTGCTGGAA AAAGCTTCAG TTTCATTTCC CCATGGAATT
GGCTATATGA TTCCTTACAG CACGAAGCGC TCTCTTGACA AGTCGATCGA TCAGGTGCTG
CATACGCTTT TCGAGGCATT TCTGCTGGTT TTTCTCGTGG TGTTCATCTT TCTGCAGGAT
TTCCGTTCGA CGCTGATACC TGCGCTTGCA GTTCCCGTGG CGATTATCGG CACTTTTTTC
TTTATGACCC TCTTTGGTTT TTCCATCAAT CTGCTGACCC TTTTTGCGCT GATATTGGCT
ATCGGTATCG TTGTGGATGA TGCGATTGTT ATCGTCGAGG CGGTTCACGC AAAGATGGAA
CACAACCGGC TTCCGGCACG TAAAGCGACG CACCTTGTGA TGAGCGAGAT TACGGGGGCT
ATTATTTCTA TTACCCTTGT TATGGCTTCC GTGTTTCTTC CGGTTGGCTT TCTCGAAGGT
TCGACAGGGG TGTTTTACCG GCAGTTTGCC TTTACGCTGG CTATAGCAAT TCTTATTTCG
GCGGTCAATG CCCTGACGCT CAGTCCGGCG CTCTGTGCCC TTTTTCTGAC GAATGAGCAT
ATCGGTGAGG GGGGGGGAAA GACCGGTTGG TTCAAGGGGT TTGAGCGACG CCTGTTCAAA
GGGTTCAATA CCGGTTTTGG CCTGCTCAAC GAGCGCTATG TCAGGACGCT CGGGTTTCTC
ATCAGGAGGA AGTGGTTGAG CCTCGGCGGT CTTGTTGCTG TGTCCGGTCT GGCTTTCTGG
ATGGCCTGGT CGGCTCCGTC GGGTTTCATT CCTGATGAAG ACAACGGCTT TTTTATCATC
AGTGCATCAT TGCCTGCCGG TGCCTCGCTT GACCGGACGA TAGCGGCTCT TGACAAGGTG
GAAGGGGTGC TTGAGGGTGA TGAGAGCGTC GAAACCGTGA TAGCCGTTTC GGGTATCGAT
CTTATTACAA GTTCAAGTTC TCCATCGGCT GGTCTTGTTT TTGTCAGCCT CAAAGATGCG
GAGAATCGAG GTCCTGTTAA GGATATCGGG GCCATTATGG GTCGGATTAC AGGAAAACTG
TCATCGATAT CCGAAGGGAC TTTTTTCCCC ATTCAGCCCC CAACCGTGCC GGGTTTCGGC
AACGTTGGCG GACTTGAAGT CGTGTTGCAG GACAGGACGT CGGGCAGTCT TCAGGATTTC
ACCGGCGTGG CTGACGGCTA CATCGGTGCC TTGATGCAGC GGCCTGAAAT TGCCTTTGCG
TTTACTATGT TCAATACGGG TTACCCACAG TATGAACTTG AGGTTGATAA CGTCAAAGCC
AGTCAGCTCG GGGTCGATGT CAAGGATCTT CTGAAAGTGA TGCAGGCCTT TTACGGCAGC
CTTCAGGTAT CGGATTTCAA TCGTTTCGGC AAATATTACC GGGTAGTTAT GCAGGCGCGT
GCAGAGGATC GGACCGAACC GTCTTCTCTT GAAGGGGTGT TCGTGAAAAA CGCCTCAGGG
GAGATGGTTC CCATGAACAG TATGGTGAAG CTGAAACGGG TCTACGGTCC ACAGACGGTC
GACCATTTCA ATTTGTTCAA CGCGTTGACG GTCAATGCCA GTGTTGCTCC GGGCTATACC
ACCGGTCAGG CTATCAAAGC GGCCGAAGAG GTTGCACTGT CAACGCTTCC GGCAGGGTTT
TCCTATGACT GGAAGGGGGT AAGCAGGGAG GAGATTGAGT CTGGCGGGCA GTCTGTCTAT
ATTTTTATTC TTTCACTGAT CTTTGTGTAT CTGCTCCTTT CGGCGCAGTA TGAAAGCTAT
ATTCTTCCGC TCGCGGTTAT TTTTTCCATT CCAACTGGTA TTGTCGGGAT CTTTGCCGGC
ATACGGGCAT TAGGGATTGA AAACAATATT TATGTGCAGG TGGCCATGAT TATGCTGATC
GGGCTGCTTG CCAAAAACGC TATTCTTATC GTCGAATATG CCATTCAGAG AAGAAGAGCC
GGCATGCCTC TCCTCGATTC AGCTATCGAA GGTTCAAGGA TGAGGTTTCG TCCTATTCTG
ATGACATCAC TGGCTTTTGT TGTTGGTCTT TTGCCTCTTC TGTGGGCTTC CGGCCCTTCG
GCGCTTGGCA ACCATTCGAT CGGTGCGGCA GCGGTAGGCG GAATGCTGAG CGGAGTGTTC
CTCGGGGTTC TCATTATTCC CGTGCTCTAC ATGGTATTCC AGGGGCTGCA GGAGAAGATC
AGCGGGCCTG CGCGCGGGTT TGATGATGAT CCCCTTCAGG AGGAGTGA
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| Protein sequence | MFDRFINRPV LATVISVFFV LLGLIGISQL PLTQFPDIAP PSVSVSTSYP GASAETIARS
VAPSLEEAIN GVEDMTYMTS TSSNDGSLNI SVFFKLGTDP DQAAVNVQNR VSRATSQLPE
EVRNIGVTTS KKQNSMIMLI TLYSDDPDTY DATFLQNYAK INLIPEIQRV NGVGQASVFG
SKDYSMRIWL EPARMAAYRI TPQEVISAVQ NQNLEAAPGR FGEGSREALE LIIRYKGKMK
EPSDYEGIVL RVNADGSLLR LRDIARVELG SYSYAVQADA NGKESVTMAI YQSAGSNSND
IQIGLQAVLE KASVSFPHGI GYMIPYSTKR SLDKSIDQVL HTLFEAFLLV FLVVFIFLQD
FRSTLIPALA VPVAIIGTFF FMTLFGFSIN LLTLFALILA IGIVVDDAIV IVEAVHAKME
HNRLPARKAT HLVMSEITGA IISITLVMAS VFLPVGFLEG STGVFYRQFA FTLAIAILIS
AVNALTLSPA LCALFLTNEH IGEGGGKTGW FKGFERRLFK GFNTGFGLLN ERYVRTLGFL
IRRKWLSLGG LVAVSGLAFW MAWSAPSGFI PDEDNGFFII SASLPAGASL DRTIAALDKV
EGVLEGDESV ETVIAVSGID LITSSSSPSA GLVFVSLKDA ENRGPVKDIG AIMGRITGKL
SSISEGTFFP IQPPTVPGFG NVGGLEVVLQ DRTSGSLQDF TGVADGYIGA LMQRPEIAFA
FTMFNTGYPQ YELEVDNVKA SQLGVDVKDL LKVMQAFYGS LQVSDFNRFG KYYRVVMQAR
AEDRTEPSSL EGVFVKNASG EMVPMNSMVK LKRVYGPQTV DHFNLFNALT VNASVAPGYT
TGQAIKAAEE VALSTLPAGF SYDWKGVSRE EIESGGQSVY IFILSLIFVY LLLSAQYESY
ILPLAVIFSI PTGIVGIFAG IRALGIENNI YVQVAMIMLI GLLAKNAILI VEYAIQRRRA
GMPLLDSAIE GSRMRFRPIL MTSLAFVVGL LPLLWASGPS ALGNHSIGAA AVGGMLSGVF
LGVLIIPVLY MVFQGLQEKI SGPARGFDDD PLQEE
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