| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1398 |
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| Symbol | |
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| ID | 6460383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1517253 |
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| End bp | 1518680 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642725383 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002016066 |
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| Protein GI | 194334206 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00173951 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.829767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG ATACAATGAA CATATCGGTT ACACAGCGCA TTACTCTGAT TGCTTTGATC
GCATCGCTTT CTTCATGCAG TATGAGCGGC AAATATATAC AGCCGGAGAC AGGCGTTCCA
TCCTCTTTCA GAGGAGAACA AAGCGCTCAG CAACACCCTC TTCACTCCTC ATCAACGATA
GGACGCCTTT CCTACAGGAC TTTTTTTCAG GATCCAGCGC TGCTTGTGCT CATTGAATCT
GCTATAGCGC ATAACAGTGA TCTTCAACTG GCGATGAAGA ATATCGACTA TGCATCGCTT
ACTCTCCGTC AGGCCGGGCT TTCGGGGCTT CCCGGATTTG GTCTGCAGGG GAGCGCCAGT
TCATCGGGAA CCTCTGACTA CGGGAGTAGC CCGCTTTCCG ATGGAGAAGA GAGCGTCGAG
ACGTTCAGCG CATCGGCTTA CGCCTCATGG GAACTTGATA TCTGGGGTAA AATCCGCAGC
CGCAAAAAGT CGGCGCTTGC AGGCTATCTT GAATCGGTCG AGGCAGGAAA AGCGGTGCAG
ACCCGCCTTG TGGCTTCTGT GGCGGAAGGA TACTCTACGC TGCAGATGCT CGATACACAG
TATGCGGTAA CCGCTCAAAA CCTGGAGCTT GCCGCTACGA CGCTTTCCAT GATGCGTCTC
CAGTATGATG CGGGGCTGGT GACCTCACTG GCGGTTGACC GGCAGGAGGC ATTGAAGCTC
GATGCCGAGG CCGGTCTGGC AAAGATCGAG CAGCAGATCG CGCTTCAGGA AAACGCGTTG
AGCGTTCTGT GCGGAAGGAT GCCTGAAGGT ATTGAGCGTG GCGCTGTACG TCCTATGCAG
AATCGCTTTT CCGCTGGCAT TCCTGCCGCA CTGCTTTCAA ACAGGCCGGA TGTCAAGGCT
GCCGAGCTTG CGTTGATGAA AGCGCATGCA GAGACCGGAG TCGCAGCGGC AAACCTGTAT
CCGTCACTGA CAATCAGTGC TGAAGCAGGC TCTGAGGCAC TCAAGGCAAG CGACTGGTTT
ACGTTTCCCG GCTCATTGTT CAGTTTTGTT CAGGGCGCTG TTCTGCAGCC GATTTTTCAG
CAGGGAACAT TGAGGACAGC CTACAAGCAG TCGCAGGTCG TGCGTGAAGA GGAGGAGATA
CGTTTTCGCC AGGCGGTTCT CGATGCGGTC AGAGAGGTTT CTGACGCTCT TGTGACGATT
GATAAGCTCG ATGTTCAGCA ACGGGCAGCA GAAAAGCAGG TCGCTCTTCT TCAGCAGTCG
GTTACCAATG CCGGTCTTCT GTTTCAGGGC GGTATGGCTG ATTACCTTGA CGTTATTTCT
GCTCAGTCCG CAGCCCTCGA TGCGGAACTT TCCCTTTCAG ATATTCGTCG TCAGCAGCGC
AATGCGGTGA CGGAGCTCTA CCGGGCAGCG GGAGGGGGCT GGCAGTAG
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| Protein sequence | MKRDTMNISV TQRITLIALI ASLSSCSMSG KYIQPETGVP SSFRGEQSAQ QHPLHSSSTI
GRLSYRTFFQ DPALLVLIES AIAHNSDLQL AMKNIDYASL TLRQAGLSGL PGFGLQGSAS
SSGTSDYGSS PLSDGEESVE TFSASAYASW ELDIWGKIRS RKKSALAGYL ESVEAGKAVQ
TRLVASVAEG YSTLQMLDTQ YAVTAQNLEL AATTLSMMRL QYDAGLVTSL AVDRQEALKL
DAEAGLAKIE QQIALQENAL SVLCGRMPEG IERGAVRPMQ NRFSAGIPAA LLSNRPDVKA
AELALMKAHA ETGVAAANLY PSLTISAEAG SEALKASDWF TFPGSLFSFV QGAVLQPIFQ
QGTLRTAYKQ SQVVREEEEI RFRQAVLDAV REVSDALVTI DKLDVQQRAA EKQVALLQQS
VTNAGLLFQG GMADYLDVIS AQSAALDAEL SLSDIRRQQR NAVTELYRAA GGGWQ
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