Gene Paes_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1392 
Symbol 
ID6460715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1511557 
End bp1512090 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID642725377 
Producthypothetical protein 
Protein accessionYP_002016060 
Protein GI194334200 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.11461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAT CCGTCACCGT CTACTGCAGT TCAAGCAATC GCGTTTCAGA AGAGTTTTTC 
AAAGCAGCAT CGGAACTTGG TAAAACCCTT GCTGAAAAGC AAATCGGACT GGTATTCGGA
GGAGGCAATG TCGGGCTGAT GGGTTGCATT GCTAATGCCG TGATGGAGAA CGGAGGCAAC
GTCCGCGGAA TCATTCCGCG CTTTCTGGAA GAAAAAGAGG TCGGTCATTA CGGCATTACA
GAACTCCATG TCGTCGAAAC CATGCATGAA CGAAAGATAA AACTGACCGA ATGGGCCGAT
GCATTCATTG TCCTCCCCGG CGGCTTCGGT ACACTCGACG AACTGATTGA AGTCATTACC
TGGCGCCATC TCGGTCATCA CAATAAACCA ATACTGCTCT TCAACGTCAA CGGCTTCTGG
AACCCGCTGA CTGACTTCTT CGACAATCTC GCATCACAGC ATATGGTCAA GCCGGACCAT
CACAAACTCT ATACCATCTG CAACTCCATA GAAGAGATTC TCGTATCGCT GTAA
 
Protein sequence
MTRSVTVYCS SSNRVSEEFF KAASELGKTL AEKQIGLVFG GGNVGLMGCI ANAVMENGGN 
VRGIIPRFLE EKEVGHYGIT ELHVVETMHE RKIKLTEWAD AFIVLPGGFG TLDELIEVIT
WRHLGHHNKP ILLFNVNGFW NPLTDFFDNL ASQHMVKPDH HKLYTICNSI EEILVSL